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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_3704 and Ac3H11_3705 overlap by 4 nucleotides
Ac3H11_3705 and Ac3H11_3706 are separated by 1229 nucleotides
Ac3H11_3706 and Ac3H11_3707 are separated by 4 nucleotides
Ac3H11_3707 and Ac3H11_3708 are separated by 257 nucleotides
Ac3H11_3704 - Urea ABC transporter, permease protein UrtC, at 63,564 to 64,703
_3704
Ac3H11_3705 - Urea ABC transporter, ATPase protein UrtD, at 64,700 to 65,575
_3705
Ac3H11_3706 - Urea ABC transporter, ATPase protein UrtE, at 66,805 to 67,497
_3706
Ac3H11_3707 - Membrane-associated phospholipid phosphatase (EC 3.1.3.27), at 67,502 to 68,398
_3707
Ac3H11_3708 - Transcription regulator [contains diacylglycerol kinase catalytic domain], at 68,656 to 69,720
_3708
Group
Condition
Ac3H11
_3704
Ac3H11
_3705
Ac3H11
_3706
Ac3H11
_3707
Ac3H11
_3708
carbon source
succinate (C)
+0.2
N.D.
+0.2
-3.2
+0.2
carbon source
L-Lactate (C)
+0.3
N.D.
+0.0
-1.8
-0.6
nitrogen source
L-Arginine (N)
-1.0
N.D.
-1.0
+0.2
+0.6
carbon source
D-Lactate (C)
+0.3
N.D.
-0.3
-1.7
+0.4
carbon source
pyruvate (C)
+0.2
N.D.
+0.5
-2.1
+0.3
nitrogen source
Uridine (N)
+0.1
N.D.
-0.3
+0.1
-1.0
stress
Phosphomycin 0.06 mg/ml
-0.1
N.D.
+0.2
-0.3
-0.9
carbon source
D-Lactate (C)
+0.4
N.D.
+0.5
-1.7
-0.3
carbon source
L-Lactate (C)
+0.3
N.D.
+0.0
-1.4
+0.1
stress
Dimethyl Sulfoxide 6 vol%
-0.1
N.D.
-0.1
+0.4
-1.0
lb
LB
-0.3
N.D.
-0.7
-0.1
+0.4
carbon source
succinate (C)
+0.2
N.D.
+0.3
-1.6
+0.4
carbon source
a-Ketoglutaric (C)
-0.0
N.D.
-0.2
-0.8
+0.5
carbon source
D,L-Lactate (C)
+0.3
N.D.
+0.2
-1.4
+0.5
carbon source
L-Malic (C)
+0.3
N.D.
+0.8
-2.5
+1.0
pH
LB, pH10
+0.1
N.D.
-0.7
+1.2
-0.7
pH
LB, pH10
-0.3
N.D.
-0.1
+0.8
-0.5
carbon source
pyruvate (C)
+0.6
N.D.
+0.6
-2.5
+1.2
nitrogen source
L-Alanine (N)
+0.2
N.D.
-0.6
-0.3
+0.5
nitrogen source
Ammonium chloride (N)
+0.4
N.D.
-0.6
+0.4
-0.2
stress
perchlorate 25 mM
+0.1
N.D.
+0.4
+0.3
-0.8
carbon source
succinate (C)
+0.4
N.D.
+0.5
-0.9
+0.1
carbon source
pyruvate (C)
+0.0
N.D.
+0.5
-0.7
+0.5
carbon source
D-Gluconic Acid (C)
+0.4
N.D.
+0.5
-1.7
+1.1
carbon source
D-Gluconic Acid (C)
+0.6
N.D.
+0.6
-1.4
+0.6
stress
Bacitracin 0.032 mg/ml
+0.2
N.D.
+0.6
-0.5
+0.2
carbon source
a-Ketoglutaric (C)
+0.2
N.D.
+0.4
-0.7
+0.6
stress
Paraquat dichloride 0.01 mg/ml
-0.3
N.D.
+0.2
-0.2
+1.2
stress
Chlorite 0.1 mM
+0.1
N.D.
-0.2
+0.3
+1.0
stress
Cisplatin 0.005 mg/ml
+0.3
N.D.
+0.0
+0.1
+1.3
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