Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3743 and Ac3H11_3685 are separated by 19 nucleotidesAc3H11_3685 and Ac3H11_3686 overlap by 4 nucleotidesAc3H11_3686 and Ac3H11_3687 are separated by 119 nucleotidesAc3H11_3687 and Ac3H11_3688 are separated by 64 nucleotides Ac3H11_3743 - tRNA-Ser-TGA, at 43,289 to 43,373 _3743 Ac3H11_3685 - Urease accessory protein UreG, at 43,393 to 44,076 _3685 Ac3H11_3686 - Urease accessory protein UreF, at 44,073 to 44,783 _3686 Ac3H11_3687 - Urease accessory protein UreE, at 44,903 to 45,553 _3687 Ac3H11_3688 - Histone acetyltransferase HPA2, at 45,618 to 46,106 _3688
Group Condition Ac3H11_3743 Ac3H11_3685 Ac3H11_3686 Ac3H11_3687 Ac3H11_3688
nitrogen source L-Arginine (N) N.D. -2.0 -2.2 -2.0 -0.6
nitrogen source D-Alanine (N) N.D. +0.0 -1.0 -3.5 -0.1
stress Cisplatin 0.005 mg/ml N.D. +0.3 -1.0 -3.2 +0.1
motility inner cut, R2A soft agar motility assay N.D. -0.3 -1.6 -1.8 +0.3
stress copper (II) chloride 2 mM N.D. -0.2 -1.1 -2.1 +0.4
nitrogen source Ammonium chloride (N) N.D. -0.3 -0.2 -2.3 +0.0
stress Paraquat dichloride 0.01 mg/ml N.D. +0.0 -0.6 -2.4 +0.2
nitrogen source L-Alanine (N) N.D. +0.7 +0.4 -3.5 +0.1
stress Cobalt chloride 0.32 mM N.D. -0.0 -0.2 -1.8 +0.1
stress D-Cycloserine 0.05 mg/ml N.D. +0.3 -0.1 -2.0 -0.1
stress A22 0.025 mg/ml N.D. -0.2 -0.0 -1.8 +0.4
stress Fusidic 0.001 mg/ml N.D. -0.3 -0.3 -1.2 +0.2
stress Bacitracin 0.032 mg/ml N.D. +0.2 +0.6 -2.3 +0.0
pH LB, pH9 N.D. +0.0 +0.2 -1.7 +0.1
stress Doxycycline hyclate 0.000025 mg/ml N.D. +0.2 -0.4 -1.2 -0.1
stress nitrite 10 mM N.D. +0.1 -0.5 -1.2 +0.2
carbon source D,L-Lactate (C) N.D. -0.2 +0.2 -1.3 -0.0
temperature LB 30C N.D. +0.1 +0.1 -1.5 -0.1
stress Ceftazidime 0.01 mg/ml N.D. +0.2 -0.3 -1.3 +0.0
stress Cisplatin 0.0025 mg/ml N.D. +0.1 +0.4 -1.7 +0.1
pH LB, pH10 N.D. +0.5 +0.8 -2.2 -0.0
nitrogen source L-Threonine (N) N.D. -0.0 +0.6 -1.0 -0.1
pH LB, pH7 N.D. +0.1 +0.7 -0.7 -0.3
pH LB, pH10 N.D. -0.1 +1.0 -0.8 +0.2
stress sodium fluoride 35 mM N.D. -0.2 +0.1 +1.3 -0.2
stress Nickel (II) chloride 0.6 mM N.D. -0.0 -0.3 +1.1 +0.3
stress Bacitracin 0.016 mg/ml N.D. -0.3 +0.6 +1.3 -0.2
nitrogen source L-Leucine (N) N.D. +0.3 -0.1 +1.4 -0.1
stress copper (II) chloride 1 mM N.D. -0.1 +0.4 +1.2 +0.0
stress nitrite 10 mM N.D. +0.1 +0.1 +2.0 +0.1
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