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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_3566 and Ac3H11_3567 are separated by 247 nucleotides
Ac3H11_3567 and Ac3H11_3568 are separated by 592 nucleotides
Ac3H11_3568 and Ac3H11_3569 are separated by 14 nucleotides
Ac3H11_3569 and Ac3H11_3570 are separated by 182 nucleotides
Ac3H11_3566 - 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7), at 118,854 to 120,746
_3566
Ac3H11_3567 - TRAP transporter solute receptor, unknown substrate 6, at 120,994 to 122,076
_3567
Ac3H11_3568 - TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6, at 122,669 to 124,453
_3568
Ac3H11_3569 - TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6, at 124,468 to 125,088
_3569
Ac3H11_3570 - Periplasmic molybdate-binding domain, at 125,271 to 126,395
_3570
Group
Condition
Ac3H11
_3566
Ac3H11
_3567
Ac3H11
_3568
Ac3H11
_3569
Ac3H11
_3570
carbon source
pyruvate (C)
N.D.
-5.3
-3.8
-5.0
+0.3
carbon source
pyruvate (C)
N.D.
-4.8
-4.2
-4.6
-0.1
carbon source
pyruvate (C)
N.D.
-3.6
-2.8
-2.8
-0.2
carbon source
D-Lactate (C)
N.D.
-3.8
-3.0
-2.1
-0.2
carbon source
D-Lactate (C)
N.D.
-3.9
-2.9
-1.5
-0.2
carbon source
D,L-Lactate (C)
N.D.
-3.1
-2.7
-2.5
+0.1
carbon source
D,L-Lactate (C)
N.D.
-3.4
-2.8
-1.7
+0.2
carbon source
L-Lactate (C)
N.D.
-3.2
-2.4
-2.1
+0.2
carbon source
L-Lactate (C)
N.D.
-3.4
-2.2
-0.8
-0.1
carbon source
D-Lactate (C)
N.D.
-2.3
-1.8
-1.6
-0.1
carbon source
D,L-Lactate (C)
N.D.
-2.1
-1.8
-1.8
+0.2
carbon source
L-Lactate (C)
N.D.
-1.8
-1.3
-1.0
-0.4
stress
Sisomicin 0.001 mg/ml
N.D.
+0.1
-0.1
-0.5
-1.4
nitrogen source
D-Alanine (N)
N.D.
-0.8
-0.3
-0.3
-0.4
stress
perchlorate 10 mM
N.D.
+0.1
+0.1
-0.3
-1.7
stress
nitrate 100 mM
N.D.
-0.2
-0.2
+0.0
-1.4
motility
inner cut, R2A soft agar motility assay
N.D.
+0.2
+0.1
-1.1
-0.2
stress
Cisplatin 0.0025 mg/ml
N.D.
-0.1
+0.0
+0.6
-1.6
pH
LB, pH10
N.D.
+0.0
-0.4
-0.8
+0.5
stress
Bacitracin 0.016 mg/ml
N.D.
+0.1
+0.2
+0.6
-0.8
stress
Chlorite 0.1 mM
N.D.
+0.3
-0.2
+0.8
-0.6
phage
phage 93.1
N.D.
+0.7
+0.5
-0.2
-0.4
carbon source
succinate (C)
N.D.
+0.8
-0.1
-0.4
+0.6
carbon source
a-Ketoglutaric (C)
N.D.
+1.1
-0.2
+1.0
-0.6
carbon source
a-Ketoglutaric (C)
N.D.
+1.0
+0.3
+0.5
-0.0
phage
phage 93.1
N.D.
+0.8
+0.4
+0.8
-0.0
carbon source
D-Gluconic Acid (C)
N.D.
+1.3
+0.3
+0.3
+0.3
nitrogen source
Ammonium chloride (N)
N.D.
+1.0
+0.7
+0.1
+0.6
stress
D-Cycloserine 0.05 mg/ml
N.D.
-0.2
+0.3
+2.1
+0.2
nitrogen source
L-Threonine (N)
N.D.
+2.2
+2.1
+2.6
+0.3
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