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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3560 and Ac3H11_3561 are separated by 329 nucleotides
Ac3H11_3561 and Ac3H11_3562 are separated by 74 nucleotides
Ac3H11_3562 and Ac3H11_3563 are separated by 155 nucleotides
Ac3H11_3563 and Ac3H11_3564 are separated by 322 nucleotides
Ac3H11_3560 - Flagellar transcriptional activator FlhD, at 113,436 to 113,762
_3560
Ac3H11_3561 - Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1), at 114,092 to 114,991
_3561
Ac3H11_3562 - putative membrane protein, at 115,066 to 115,962
_3562
Ac3H11_3563 - Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit, at 116,118 to 117,272
_3563
Ac3H11_3564 - Exodeoxyribonuclease VII small subunit (EC 3.1.11.6), at 117,595 to 117,837
_3564
Group
Condition
Ac3H11
_3560
Ac3H11
_3561
Ac3H11
_3562
Ac3H11
_3563
Ac3H11
_3564
stress
Chloramphenicol 0.001 mg/ml
-0.1
+0.0
-0.2
-2.9
N.D.
stress
Chloramphenicol 0.0005 mg/ml
+0.0
-0.0
-0.0
-2.1
N.D.
motility
inner cut, R2A soft agar motility assay
-1.1
-0.2
+0.1
-0.3
N.D.
carbon source
a-Ketoglutaric (C)
-1.2
+0.0
-0.1
+0.1
N.D.
lb
LB
-1.3
-0.0
-0.0
+0.1
N.D.
stress
Nickel (II) chloride 0.6 mM
-1.4
-0.1
+0.1
+0.7
N.D.
motility
inner cut, R2A soft agar motility assay
-0.7
+0.3
+0.3
-0.2
N.D.
lb
LB
-0.9
+0.2
+0.1
+0.6
N.D.
stress
Cobalt chloride 0.16 mM
-0.7
+0.0
-0.1
+0.8
N.D.
stress
D-Cycloserine 0.05 mg/ml
+1.2
-0.1
-0.2
-0.8
N.D.
nitrogen source
L-Phenylalanine (N)
+0.9
-0.1
-0.1
-0.3
N.D.
pH
LB, pH9
+0.2
-0.2
-0.2
+0.9
N.D.
nitrogen source
L-Isoleucine (N)
+1.4
-0.1
-0.0
-0.5
N.D.
stress
Zinc 1 mM
+0.5
-0.3
+0.1
+0.5
N.D.
nitrogen source
Uridine (N)
+1.8
-0.1
-0.9
+0.1
N.D.
carbon source
Glycerol (C)
+0.9
+0.2
-0.1
-0.1
N.D.
nitrogen source
L-Threonine (N)
+0.9
+0.3
-0.0
-0.2
N.D.
stress
Sisomicin 0.001 mg/ml
+0.8
+0.3
-0.3
+0.4
N.D.
carbon source
D-Gluconic Acid (C)
+0.7
-0.1
+0.4
+0.3
N.D.
nitrogen source
L-tyrosine (N)
+0.5
+0.0
+0.1
+0.6
N.D.
pH
LB, pH5
+0.6
+0.1
+0.1
+0.5
N.D.
stress
perchlorate 10 mM
+1.0
+0.2
+0.1
+0.5
N.D.
stress
Bacitracin 0.008 mg/ml
+1.3
+0.2
+0.1
+0.5
N.D.
phage
phage 93.1
+1.9
-0.1
-0.0
+0.2
N.D.
phage
phage 93.2
+1.9
-0.1
-0.0
+0.2
N.D.
stress
Cisplatin 0.0025 mg/ml
+1.6
+0.3
-0.0
+0.3
N.D.
nitrogen source
Ammonium chloride (N)
+2.3
-0.6
+0.2
+0.6
N.D.
phage
phage 93.1
+2.9
+0.1
+0.1
+0.2
N.D.
pH
LB, pH10
+0.8
+0.1
+0.2
+2.5
N.D.
pH
LB, pH10
+1.1
+0.1
+0.4
+2.6
N.D.
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