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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3543 and Ac3H11_3544 are separated by 95 nucleotides
Ac3H11_3544 and Ac3H11_3545 are separated by 159 nucleotides
Ac3H11_3545 and Ac3H11_3546 are separated by 177 nucleotides
Ac3H11_3546 and Ac3H11_3547 are separated by 85 nucleotides
Ac3H11_3543 - hypothetical protein, at 93,918 to 94,127
_3543
Ac3H11_3544 - FIG00349188: hypothetical protein, at 94,223 to 96,109
_3544
Ac3H11_3545 - Glyoxalase family protein, at 96,269 to 96,892
_3545
Ac3H11_3546 - Protein yceI precursor, at 97,070 to 97,642
_3546
Ac3H11_3547 - Probable signal peptide protein, at 97,728 to 98,303
_3547
Group
Condition
Ac3H11
_3543
Ac3H11
_3544
Ac3H11
_3545
Ac3H11
_3546
Ac3H11
_3547
nitrogen source
L-Phenylalanine (N)
-0.8
+0.1
-5.3
+0.1
+0.3
nitrogen source
D-Alanine (N)
-4.6
-0.2
-0.1
+0.3
+0.1
nitrogen source
L-Alanine (N)
-4.4
+0.0
-0.1
+0.5
-0.5
nitrogen source
Ammonium chloride (N)
-3.5
+0.1
+0.1
+0.6
-0.5
carbon source
a-Ketoglutaric (C)
-1.0
-0.1
+0.0
-0.2
-1.0
nitrogen source
L-Isoleucine (N)
-1.9
-0.4
+0.2
+0.2
-0.0
carbon source
pyruvate (C)
-1.4
+0.2
-0.2
-0.1
-0.2
carbon source
D-Ribose (C)
-2.2
+0.1
-0.1
+0.4
+0.1
carbon source
D-Galactose (C)
-1.2
+0.3
-0.1
+0.2
-0.6
lb
LB
-1.4
-0.2
+0.1
+0.0
+0.2
stress
sodium fluoride 25 mM
-1.4
+0.2
+0.2
+0.0
-0.2
nitrogen source
Uridine (N)
-1.8
+0.1
-0.2
+0.1
+0.5
stress
Bacitracin 0.008 mg/ml
-1.5
-0.2
-0.0
+0.2
+0.4
nitrogen source
L-Threonine (N)
-0.9
-0.1
+0.2
+0.1
-0.4
lb
LB
-1.7
+0.1
+0.3
+0.0
+0.2
motility
inner cut, R2A soft agar motility assay
-0.9
+0.4
-0.0
+0.2
-0.5
carbon source
D-Galactose (C)
+0.3
+0.2
-0.4
+0.1
-0.8
stress
Cobalt chloride 0.4 mM
-0.1
+0.3
-0.3
+0.4
-0.7
pH
LB, pH6
-0.8
+0.1
-0.1
+0.1
+0.6
nitrogen source
L-Glutamine (N)
-0.8
+0.1
-0.1
-0.0
+0.8
nitrogen source
L-tyrosine (N)
-0.0
+0.1
-1.3
+0.7
+0.5
stress
Bacitracin 0.032 mg/ml
+0.9
+0.0
-0.4
-0.1
+0.6
pH
LB, pH9
+0.6
+0.0
-0.4
+0.2
+0.6
phage
phage 93.1
+0.9
-0.2
-0.0
+0.1
+0.5
lb
LB
+1.0
+0.2
-0.2
+0.3
+0.4
stress
Fusidic 0.001 mg/ml
+0.9
+0.1
-0.1
+0.3
+0.4
pH
LB, pH10
+0.3
+0.0
-0.1
+1.0
+0.5
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.4
+0.2
+1.2
+0.4
+0.0
phage
phage 93.1
+1.0
+0.1
-0.0
+0.4
+0.7
pH
LB, pH10
+1.9
+0.0
-0.3
+0.6
+0.3
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