Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3541 and Ac3H11_3542 are separated by 90 nucleotidesAc3H11_3542 and Ac3H11_3543 overlap by 15 nucleotidesAc3H11_3543 and Ac3H11_3544 are separated by 95 nucleotidesAc3H11_3544 and Ac3H11_3545 are separated by 159 nucleotides Ac3H11_3541 - UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9), at 90,057 to 90,944 _3541 Ac3H11_3542 - Valyl-tRNA synthetase (EC 6.1.1.9), at 91,035 to 93,932 _3542 Ac3H11_3543 - hypothetical protein, at 93,918 to 94,127 _3543 Ac3H11_3544 - FIG00349188: hypothetical protein, at 94,223 to 96,109 _3544 Ac3H11_3545 - Glyoxalase family protein, at 96,269 to 96,892 _3545
Group Condition Ac3H11_3541 Ac3H11_3542 Ac3H11_3543 Ac3H11_3544 Ac3H11_3545
nitrogen source L-Phenylalanine (N) N.D. N.D. -0.8 +0.1 -5.3
nitrogen source D-Alanine (N) N.D. N.D. -4.6 -0.2 -0.1
nitrogen source L-Alanine (N) N.D. N.D. -4.4 +0.0 -0.1
nitrogen source Ammonium chloride (N) N.D. N.D. -3.5 +0.1 +0.1
carbon source D-Ribose (C) N.D. N.D. -2.2 +0.1 -0.1
nitrogen source L-Isoleucine (N) N.D. N.D. -1.9 -0.4 +0.2
nitrogen source Uridine (N) N.D. N.D. -1.8 +0.1 -0.2
stress Bacitracin 0.008 mg/ml N.D. N.D. -1.5 -0.2 -0.0
lb LB N.D. N.D. -1.4 -0.2 +0.1
carbon source pyruvate (C) N.D. N.D. -1.4 +0.2 -0.2
lb LB N.D. N.D. -1.7 +0.1 +0.3
nitrogen source L-tyrosine (N) N.D. N.D. -0.0 +0.1 -1.3
nitrogen source L-Serine (N) N.D. N.D. -1.1 +0.1 -0.2
stress sodium fluoride 25 mM N.D. N.D. -1.4 +0.2 +0.2
stress Chlorate 20 mM N.D. N.D. -1.2 +0.1 +0.1
carbon source D-Galactose (C) N.D. N.D. -1.2 +0.3 -0.1
carbon source Glycerol (C) N.D. N.D. -1.0 +0.1 +0.0
pH LB, pH6 N.D. N.D. -0.8 +0.1 -0.1
nitrogen source L-Threonine (N) N.D. N.D. -0.9 -0.1 +0.2
motility inner cut, R2A soft agar motility assay N.D. N.D. -0.8 +0.2 -0.1
motility inner cut, R2A soft agar motility assay N.D. N.D. -0.9 +0.4 -0.0
nitrogen source L-Leucine (N) N.D. N.D. -0.8 +0.3 +0.1
stress Bacitracin 0.032 mg/ml N.D. N.D. +0.9 +0.0 -0.4
phage phage 93.1 N.D. N.D. +0.9 -0.2 -0.0
carbon source a-Ketoglutaric (C) N.D. N.D. +0.9 +0.2 -0.1
stress Fusidic 0.001 mg/ml N.D. N.D. +0.9 +0.1 -0.1
lb LB N.D. N.D. +1.0 +0.2 -0.2
phage phage 93.1 N.D. N.D. +1.0 +0.1 -0.0
pH LB, pH10 N.D. N.D. +1.9 +0.0 -0.3
stress Polymyxin B sulfate 0.0001 mg/ml N.D. N.D. +0.4 +0.2 +1.2
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