Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3523 and Ac3H11_3524 are separated by 192 nucleotidesAc3H11_3524 and Ac3H11_3525 are separated by 96 nucleotidesAc3H11_3525 and Ac3H11_3526 overlap by 36 nucleotidesAc3H11_3526 and Ac3H11_3527 are separated by 115 nucleotides Ac3H11_3523 - Xylonate dehydratase (EC 4.2.1.82), at 68,212 to 69,993 _3523 Ac3H11_3524 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 70,186 to 71,193 _3524 Ac3H11_3525 - hypothetical protein, at 71,290 to 71,421 _3525 Ac3H11_3526 - Transcriptional regulator, LysR family, at 71,386 to 72,324 _3526 Ac3H11_3527 - hypothetical protein, at 72,440 to 72,925 _3527
Group Condition Ac3H11_3523 Ac3H11_3524 Ac3H11_3525 Ac3H11_3526 Ac3H11_3527
stress Cisplatin 0.005 mg/ml -0.5 -0.2 -4.0 +0.3 N.D.
phage phage 93.2 +0.1 -0.2 -3.7 +0.1 N.D.
pH LB, pH10 -0.0 -0.0 -3.7 +0.3 N.D.
nitrogen source L-Alanine (N) +0.6 +0.1 -3.8 +0.1 N.D.
carbon source D-Ribose (C) +0.3 -0.3 -2.8 -0.2 N.D.
motility inner cut, R2A soft agar motility assay +0.3 -0.2 -2.0 -0.7 N.D.
stress Phosphomycin 0.02 mg/ml -0.3 +0.1 -2.6 +0.2 N.D.
nitrogen source Ammonium chloride (N) +0.0 +0.2 -2.2 -0.0 N.D.
nitrogen source L-Isoleucine (N) -0.4 +0.3 -1.7 -0.1 N.D.
nitrogen source L-Serine (N) -0.1 +0.2 -1.8 -0.0 N.D.
phage phage 93.1 +0.4 -0.2 -2.1 +0.1 N.D.
lb LB +0.1 -0.0 -1.5 -0.0 N.D.
carbon source pyruvate (C) +0.1 -0.1 -1.7 +0.2 N.D.
carbon source succinate (C) +0.0 -0.2 -1.2 -0.1 N.D.
carbon source D-Gluconic Acid (C) -0.0 +0.0 -1.7 +0.2 N.D.
stress sodium fluoride 50 mM -0.0 -0.2 -1.5 +0.3 N.D.
stress Nickel (II) chloride 0.6 mM +0.3 +0.0 -1.5 +0.1 N.D.
motility inner cut, R2A soft agar motility assay +0.3 -0.2 -0.7 -0.4 N.D.
carbon source D-Galactose (C) +0.0 +0.4 -1.2 -0.0 N.D.
pH LB, pH5 -0.1 -0.2 +1.1 -0.1 N.D.
motility inner cut, R2A soft agar motility assay -0.1 -0.1 +1.4 -0.3 N.D.
carbon source L-Arabinose (C) +0.1 -0.2 +1.1 +0.2 N.D.
pH LB, pH10 +0.4 -0.2 +1.0 -0.0 N.D.
pH LB, pH9 -0.1 +0.1 +1.4 -0.1 N.D.
stress Bacitracin 0.032 mg/ml -0.1 +0.1 +1.5 -0.0 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml +0.1 +0.3 +1.3 -0.0 N.D.
carbon source D-Glucose (C) +0.3 +0.0 +1.1 +0.2 N.D.
stress Nickel (II) chloride 0.6 mM +0.0 +0.2 +1.0 +0.4 N.D.
stress perchlorate 25 mM +0.2 +0.3 +1.2 +0.2 N.D.
stress perchlorate 10 mM +0.3 +0.3 +1.4 -0.2 N.D.
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