Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3514 and Ac3H11_3515 are separated by 44 nucleotidesAc3H11_3515 and Ac3H11_3516 are separated by 28 nucleotidesAc3H11_3516 and Ac3H11_3517 are separated by 265 nucleotidesAc3H11_3517 and Ac3H11_3518 are separated by 110 nucleotides Ac3H11_3514 - Antibiotic biosynthesis monooxygenase, at 61,067 to 61,369 _3514 Ac3H11_3515 - putative transcriptional regulator, LysR family, at 61,414 to 62,292 _3515 Ac3H11_3516 - hypothetical protein, at 62,321 to 62,725 _3516 Ac3H11_3517 - Transcriptional regulator, LysR family, at 62,991 to 63,893 _3517 Ac3H11_3518 - Rrf2-linked NADH-flavin reductase, at 64,004 to 64,645 _3518
Group Condition Ac3H11_3514 Ac3H11_3515 Ac3H11_3516 Ac3H11_3517 Ac3H11_3518
lb LB -0.0 -0.2 +0.3 -0.9 -2.1
stress copper (II) chloride 2 mM -0.1 -0.0 +0.3 -0.7 -2.1
carbon source a-Ketoglutaric (C) -0.1 -0.2 -1.1 -0.5 -0.3
stress A22 0.025 mg/ml +0.1 -0.0 -0.1 -0.6 -1.2
motility inner cut, R2A soft agar motility assay +0.1 +0.5 +0.0 -1.6 -0.8
stress Cisplatin 0.0025 mg/ml -0.1 -1.4 +0.1 -0.0 -0.3
phage phage 93.1 +0.1 -0.3 +0.0 -0.3 -1.2
carbon source L-Lactate (C) -0.1 +0.0 +0.2 -1.1 -0.4
carbon source D-Lactate (C) -0.1 -0.6 -0.4 +0.2 -0.4
stress sodium fluoride 25 mM -0.0 +0.4 +0.0 -1.6 +0.1
nitrogen source D-Alanine (N) -0.0 -0.1 -1.1 -0.4 +0.7
nitrogen source L-Alanine (N) +0.0 -0.3 -0.2 -1.0 +0.6
nitrogen source L-Leucine (N) +0.0 +0.4 -0.2 -0.5 -0.5
carbon source a-Ketoglutaric (C) +0.1 +0.3 -0.4 -0.3 -0.5
motility inner cut, R2A soft agar motility assay -0.0 +0.6 +0.3 -1.0 -0.2
stress Cobalt chloride 0.32 mM +0.1 +0.2 +0.7 -0.5 -0.6
stress Chlorite 0.1 mM -0.1 -0.0 +0.7 +0.2 -0.6
stress Bacitracin 0.032 mg/ml +0.2 +0.8 -0.1 -0.5 -0.2
stress nitrate 100 mM +0.1 -0.5 +0.5 -0.5 +0.6
stress Paraquat dichloride 0.01 mg/ml -0.2 -0.3 +0.1 +0.5 +0.4
stress Sisomicin 0.001 mg/ml +0.1 +0.1 +0.9 -0.2 -0.3
stress Cisplatin 0.005 mg/ml -0.1 +0.9 +0.6 +0.5 -1.2
stress Doxycycline hyclate 0.000025 mg/ml +0.1 +0.2 -0.4 +0.6 +0.3
pH LB, pH10 +0.0 -0.0 -0.2 +0.1 +1.4
stress Aluminum chloride 4 mM -0.0 +0.3 +0.5 +0.7 +0.0
motility inner cut, R2A soft agar motility assay +0.2 -0.3 +0.3 +0.8 +0.8
nitrogen source Ammonium chloride (N) -0.1 +0.5 -0.2 +0.7 +0.9
carbon source D-Ribose (C) +0.0 +0.1 +0.5 +0.6 +0.7
stress D-Cycloserine 0.05 mg/ml -0.0 -0.4 +0.4 +0.6 +1.5
phage phage 93.2 +0.1 +0.0 +0.3 +0.2 +1.8
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