Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3455 and Ac3H11_3456 are separated by 383 nucleotidesAc3H11_3456 and Ac3H11_3457 are separated by 149 nucleotidesAc3H11_3457 and Ac3H11_3458 overlap by 4 nucleotidesAc3H11_3458 and Ac3H11_3459 are separated by 47 nucleotides Ac3H11_3455 - FOG: TPR repeat, at 4,368 to 6,128 _3455 Ac3H11_3456 - Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23), at 6,512 to 6,991 _3456 Ac3H11_3457 - FIG00555615: hypothetical protein, at 7,141 to 9,102 _3457 Ac3H11_3458 - A/G-specific adenine glycosylase (EC 3.2.2.-), at 9,099 to 10,172 _3458 Ac3H11_3459 - Hypothetical ATP-binding protein UPF0042, contains P-loop, at 10,220 to 11,083 _3459
Group Condition Ac3H11_3455 Ac3H11_3456 Ac3H11_3457 Ac3H11_3458 Ac3H11_3459
pH LB, pH10 -2.6 -0.3 +0.6 -0.2 -2.2
nitrogen source L-tyrosine (N) -3.9 +0.1 +0.6 +0.0 -1.0
pH LB, pH10 -2.5 +0.1 +0.8 +0.2 -2.2
carbon source pyruvate (C) -0.7 +0.0 -0.2 +0.0 -1.9
carbon source pyruvate (C) -0.6 +0.1 -0.0 +0.1 -2.2
carbon source succinate (C) -0.9 -0.1 +0.6 -0.1 -1.8
carbon source D-Glucose (C) -0.8 -0.1 -0.2 -0.1 -1.1
carbon source L-Lactate (C) -0.9 -0.0 +0.1 +0.0 -1.2
carbon source D-Lactate (C) -0.6 +0.1 +0.1 +0.1 -1.7
carbon source succinate (C) -0.2 -0.0 +0.1 -0.0 -1.9
carbon source L-Lactate (C) -0.7 -0.0 -0.0 +0.2 -1.4
carbon source pyruvate (C) -0.3 -0.1 -0.1 +0.0 -1.5
carbon source a-Ketoglutaric (C) -0.4 -0.2 -0.1 -0.2 -1.1
stress Cobalt chloride 0.32 mM -0.1 +0.2 +0.0 +0.0 -2.1
pH LB, pH9 -1.7 -0.1 +0.4 -0.0 -0.5
carbon source D-Gluconic Acid (C) -0.1 +0.0 +0.6 -0.0 -2.4
carbon source D-Lactate (C) -0.5 +0.2 +0.1 +0.0 -1.6
carbon source succinate (C) -0.9 +0.0 +0.6 -0.1 -1.5
carbon source D-Gluconic Acid (C) +0.2 -0.2 +0.5 -0.0 -2.0
stress copper (II) chloride 2 mM -1.3 -0.0 +0.4 -0.2 -0.5
carbon source D,L-Lactate (C) -0.8 +0.1 +0.0 +0.1 -0.9
phage phage 93.2 -0.8 +0.2 +0.1 +0.3 -0.8
stress Aluminum chloride 4 mM -0.5 +0.0 +0.4 +0.2 -1.2
carbon source L-Malic (C) +0.6 -0.0 +0.1 -0.1 -1.7
stress Fusidic 0.001 mg/ml -0.5 +0.1 +0.5 +0.0 -1.0
stress Bacitracin 0.032 mg/ml -0.5 +0.1 +0.7 -0.2 -0.8
stress Polymyxin B sulfate 0.0001 mg/ml +1.0 +0.1 +0.4 -0.2 +0.3
stress Nickel (II) chloride 0.6 mM +1.1 +0.0 +0.5 -0.0 +0.2
stress Cobalt chloride 0.16 mM +0.8 +0.1 +0.7 +0.0 +0.3
nitrogen source D-Alanine (N) +1.6 -0.1 -0.1 -0.2 +0.7
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