Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3391 and Ac3H11_3392 are separated by 27 nucleotidesAc3H11_3392 and Ac3H11_3393 are separated by 65 nucleotidesAc3H11_3393 and Ac3H11_3394 are separated by 187 nucleotidesAc3H11_3394 and Ac3H11_3395 are separated by 20 nucleotides Ac3H11_3391 - miscellaneous; unknown, at 70,786 to 71,109 _3391 Ac3H11_3392 - Transcriptional regulator, DeoR family, at 71,137 to 71,877 _3392 Ac3H11_3393 - Probable transcription regulator, at 71,943 to 72,434 _3393 Ac3H11_3394 - hypothetical protein, at 72,622 to 72,789 _3394 Ac3H11_3395 - alpha/beta hydrolase fold, at 72,810 to 73,448 _3395
Group Condition Ac3H11_3391 Ac3H11_3392 Ac3H11_3393 Ac3H11_3394 Ac3H11_3395
stress nitrate 100 mM -0.2 -0.5 -0.1 N.D. -1.3
temperature LB 30C -0.4 -0.4 -0.2 N.D. -0.5
carbon source pyruvate (C) -0.1 -0.5 -0.0 N.D. -0.5
carbon source succinate (C) -0.0 -0.1 +0.5 N.D. -1.2
carbon source Glycerol (C) -0.0 -0.2 +0.2 N.D. -0.8
stress Doxycycline hyclate 0.000025 mg/ml +0.3 -0.6 +0.1 N.D. -0.5
stress copper (II) chloride 2 mM +0.6 -0.0 -0.2 N.D. -1.0
stress Zinc 1 mM +0.1 -0.2 +0.5 N.D. -0.4
carbon source D-Glucose (C) +0.5 -0.4 +0.4 N.D. -0.1
stress syringaldehyde 2.5 mM -0.4 +0.3 +0.4 N.D. +0.1
pH LB, pH10 +0.4 -0.4 -0.5 N.D. +0.9
nitrogen source L-Isoleucine (N) +0.1 +0.2 -0.3 N.D. +0.6
stress Phosphomycin 0.02 mg/ml +0.2 +0.3 +0.4 N.D. -0.4
pH LB, pH10 +0.7 -0.5 +0.2 N.D. +0.4
nitrogen source L-Glutamine (N) +0.3 +0.3 -0.2 N.D. +0.5
stress Cobalt chloride 0.32 mM +0.6 -0.2 +0.6 N.D. -0.2
stress 5-Hydroxymethylfurfural 5 mM +0.2 -0.1 +0.1 N.D. +0.8
motility inner cut, R2A soft agar motility assay +0.2 +0.6 -0.3 N.D. +0.6
stress Sisomicin 0.001 mg/ml +0.2 +0.3 +0.6 N.D. -0.1
pH LB, pH7 +0.1 +0.3 -0.1 N.D. +0.8
stress Bacitracin 0.008 mg/ml +0.4 +0.2 +0.5 N.D. +0.0
stress nitrite 10 mM +0.3 -0.2 +0.5 N.D. +0.5
pH LB, pH6 +0.2 +0.1 +0.1 N.D. +0.7
stress Aluminum chloride 2 mM +0.5 +0.4 +0.5 N.D. -0.2
nitrogen source L-Arginine (N) +0.4 +0.3 +0.0 N.D. +0.5
pH LB, pH7 +0.4 +0.1 +0.4 N.D. +0.3
nitrogen source L-Alanine (N) +0.4 -0.1 +0.6 N.D. +0.6
nitrogen source L-Histidine (N) +0.2 +0.4 +0.1 N.D. +0.8
pH LB, pH9 +0.4 +0.2 +0.2 N.D. +0.9
nitrogen source D-Alanine (N) +0.6 +0.9 +0.0 N.D. +0.8
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