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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3325 and Ac3H11_3326 are separated by 24 nucleotides
Ac3H11_3326 and Ac3H11_3327 overlap by 4 nucleotides
Ac3H11_3327 and Ac3H11_3328 are separated by 242 nucleotides
Ac3H11_3328 and Ac3H11_3329 are separated by 12 nucleotides
Ac3H11_3325 - Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1), at 5,187 to 5,948
_3325
Ac3H11_3326 - Amino acid ABC transporter, permease protein, at 5,973 to 6,755
_3326
Ac3H11_3327 - Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2), at 6,752 to 7,501
_3327
Ac3H11_3328 - DcaP, at 7,744 to 9,033
_3328
Ac3H11_3329 - Permease of the drug/metabolite transporter (DMT) superfamily, at 9,046 to 9,999
_3329
Group
Condition
Ac3H11
_3325
Ac3H11
_3326
Ac3H11
_3327
Ac3H11
_3328
Ac3H11
_3329
nitrogen source
L-Arginine (N)
-0.9
-0.9
-1.6
+0.0
-0.3
nitrogen source
Ammonium chloride (N)
-0.7
+0.0
-0.7
-0.5
+0.5
stress
syringaldehyde 2.5 mM
-0.7
-0.5
-0.3
+0.1
+0.0
nitrogen source
L-Isoleucine (N)
-0.2
-0.2
-0.6
-0.2
-0.1
stress
Cisplatin 0.005 mg/ml
-0.4
+0.2
-1.1
-0.1
+0.3
carbon source
D-Gluconic Acid (C)
-0.6
+0.2
-0.2
-0.1
-0.3
pH
LB, pH10
-0.0
-0.2
-1.1
+0.1
+0.5
pH
LB, pH10
-0.5
-0.5
+0.2
+0.1
+0.3
phage
phage 93.2
-0.7
-0.3
+0.1
-0.2
+0.6
nitrogen source
L-Alanine (N)
+0.4
-0.2
+0.2
-0.3
-0.3
stress
copper (II) chloride 1 mM
-0.3
+0.4
-0.5
+0.1
+0.2
phage
phage 93.1
-0.2
-0.6
+0.2
-0.0
+0.3
phage
phage 93.1
-0.6
-0.3
+0.2
+0.0
+0.5
stress
Chlorite 0.1 mM
+0.1
+0.4
-0.5
+0.1
-0.3
stress
Bacitracin 0.032 mg/ml
+0.4
+0.2
-0.0
+0.2
-0.7
stress
Chlorate 20 mM
+0.3
+0.3
-0.2
+0.1
-0.4
stress
D-Cycloserine 0.05 mg/ml
-0.2
-0.2
+0.8
-0.2
-0.1
carbon source
D-Glucose (C)
-0.1
+0.2
+0.7
+0.1
-0.3
lb
LB
+0.6
+0.4
-0.5
+0.1
+0.2
stress
Doxycycline hyclate 0.000025 mg/ml
+0.2
+0.3
+0.6
-0.2
-0.1
stress
perchlorate 10 mM
+0.3
+0.5
+0.4
-0.0
-0.1
carbon source
D,L-Lactate (C)
+0.0
+0.2
+0.4
-0.2
+0.5
stress
sodium fluoride 25 mM
-0.2
+0.3
+0.5
+0.1
+0.3
stress
perchlorate 25 mM
+0.5
+0.4
+0.4
+0.1
-0.2
stress
Paraquat dichloride 0.01 mg/ml
-0.2
+0.4
+0.5
+0.4
+0.1
carbon source
L-Arabinose (C)
+0.3
+0.2
+0.8
+0.1
-0.1
motility
inner cut, R2A soft agar motility assay
+1.0
+0.1
+0.1
-0.2
+0.4
carbon source
D,L-Lactate (C)
+0.3
+0.1
+1.3
-0.1
+0.0
stress
Sisomicin 0.001 mg/ml
+0.4
+0.4
+0.6
+0.1
+0.3
stress
Cisplatin 0.0025 mg/ml
+0.4
+0.5
+0.8
+0.2
+0.1
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