Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3281 and Ac3H11_3282 are separated by 216 nucleotidesAc3H11_3282 and Ac3H11_3283 are separated by 315 nucleotidesAc3H11_3283 and Ac3H11_3284 overlap by 4 nucleotidesAc3H11_3284 and Ac3H11_3285 are separated by 112 nucleotides Ac3H11_3281 - UDP-galactose-lipid carrier transferase (EC 2.-.-.-), at 12,646 to 13,491 _3281 Ac3H11_3282 - NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4), at 13,708 to 15,012 _3282 Ac3H11_3283 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 15,328 to 16,983 _3283 Ac3H11_3284 - Sugar transporter, at 16,980 to 18,344 _3284 Ac3H11_3285 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 18,457 to 19,545 _3285
Group Condition Ac3H11_3281 Ac3H11_3282 Ac3H11_3283 Ac3H11_3284 Ac3H11_3285
carbon source succinate (C) -0.1 N.D. -0.2 -0.1 -1.3
carbon source Glycerol (C) -0.0 N.D. -0.1 -0.3 -0.7
motility inner cut, R2A soft agar motility assay -0.3 N.D. +0.0 -0.4 -0.4
temperature LB 30C -0.1 N.D. -0.1 -0.2 -0.5
carbon source pyruvate (C) -0.1 N.D. -0.2 -0.2 -0.5
stress Paraquat dichloride 0.01 mg/ml +0.2 N.D. +0.1 +0.2 -1.0
stress Sisomicin 0.001 mg/ml +0.3 N.D. +0.0 +0.2 -0.5
stress Bacitracin 0.008 mg/ml -0.1 N.D. +0.4 +0.2 -0.4
stress Polymyxin B sulfate 0.0001 mg/ml +0.3 N.D. -0.1 +0.1 -0.3
lb LB +0.2 N.D. +0.2 +0.4 -0.7
lb LB +0.4 N.D. -0.2 +0.1 -0.2
stress Zinc 1 mM +0.3 N.D. +0.2 +0.3 -0.4
stress Aluminum chloride 2 mM +0.1 N.D. +0.4 +0.2 -0.2
stress syringaldehyde 2.5 mM +0.1 N.D. +0.0 -0.2 +0.6
stress Cisplatin 0.005 mg/ml +0.3 N.D. +0.1 +0.4 -0.2
phage phage 93.1 +0.1 N.D. +0.6 +0.1 +0.1
nitrogen source L-Proline (N) +0.2 N.D. -0.1 +0.1 +0.6
nitrogen source L-Arginine (N) -0.0 N.D. +0.3 +0.2 +0.4
stress Tetracycline 0.00005 mg/ml +0.1 N.D. +0.3 +0.2 +0.3
pH LB, pH10 +0.4 N.D. +0.0 +0.2 +0.4
nitrogen source L-Alanine (N) -0.2 N.D. +0.2 +0.0 +1.0
pH LB, pH7 +0.2 N.D. +0.2 +0.2 +0.4
nitrogen source L-Isoleucine (N) +0.3 N.D. +0.3 +0.2 +0.2
nitrogen source L-Leucine (N) +0.1 N.D. +0.3 +0.2 +0.4
nitrogen source L-Histidine (N) -0.0 N.D. -0.0 +0.2 +0.9
nitrogen source D-Alanine (N) +0.0 N.D. +0.4 +0.2 +0.6
nitrogen source L-Phenylalanine (N) +0.3 N.D. +0.4 +0.2 +0.5
stress Phosphomycin 0.02 mg/ml +0.3 N.D. +0.2 +0.3 +0.7
stress Cisplatin 0.0025 mg/ml +0.7 N.D. +0.1 +0.3 +0.4
nitrogen source Ammonium chloride (N) -0.1 N.D. +0.5 +0.3 +1.1
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