Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3275 and Ac3H11_3276 are separated by 88 nucleotidesAc3H11_3276 and Ac3H11_3277 are separated by 74 nucleotidesAc3H11_3277 and Ac3H11_3278 are separated by 83 nucleotidesAc3H11_3278 and Ac3H11_3279 are separated by 111 nucleotides Ac3H11_3275 - putative lipoprotein, at 7,772 to 8,527 _3275 Ac3H11_3276 - hypothetical protein, at 8,616 to 9,071 _3276 Ac3H11_3277 - LysR family transcriptional regulator PA2758, at 9,146 to 10,087 _3277 Ac3H11_3278 - hypothetical protein, at 10,171 to 10,974 _3278 Ac3H11_3279 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 11,086 to 12,066 _3279
Group Condition Ac3H11_3275 Ac3H11_3276 Ac3H11_3277 Ac3H11_3278 Ac3H11_3279
stress Cisplatin 0.005 mg/ml +0.1 -4.6 -4.4 +0.7 N.D.
stress Cisplatin 0.0025 mg/ml +0.1 -3.9 -2.9 -0.3 N.D.
pH LB, pH10 -0.3 -2.6 -3.5 +0.0 N.D.
pH LB, pH10 +0.0 -3.0 -2.4 +0.4 N.D.
stress Dimethyl Sulfoxide 6 vol% -0.2 -0.8 -0.7 -0.0 N.D.
pH LB, pH9 -0.2 -0.7 -1.3 +0.5 N.D.
carbon source succinate (C) -0.4 -0.1 -0.2 -0.9 N.D.
phage phage 93.1 -0.2 +0.0 -1.3 +0.0 N.D.
motility inner cut, R2A soft agar motility assay -0.6 +0.4 -1.1 -0.3 N.D.
carbon source pyruvate (C) -0.2 -0.2 -0.3 -0.5 N.D.
stress sodium fluoride 25 mM -0.1 -1.0 -0.2 +0.2 N.D.
motility inner cut, R2A soft agar motility assay -0.1 +0.3 -1.1 +0.2 N.D.
stress Aluminum chloride 4 mM +0.1 -0.8 +0.3 -0.3 N.D.
carbon source a-Ketoglutaric (C) +0.3 -0.3 -1.2 +0.6 N.D.
stress perchlorate 25 mM +0.4 -0.7 +0.3 -0.4 N.D.
stress nitrite 10 mM +0.0 -0.2 -0.6 +0.5 N.D.
carbon source D-Galactose (C) -0.3 +0.2 +0.5 -0.5 N.D.
stress copper (II) chloride 1 mM +0.4 +0.0 +0.4 -0.8 N.D.
motility inner cut, R2A soft agar motility assay +0.1 -0.1 -0.5 +0.6 N.D.
carbon source L-Lactate (C) -0.0 +0.0 +0.7 -0.6 N.D.
carbon source L-Arabinose (C) -0.2 +0.2 +0.6 -0.5 N.D.
stress Zinc 1 mM -0.3 -0.1 +0.9 -0.3 N.D.
lb LB -0.2 +0.0 +0.9 -0.4 N.D.
carbon source D-Gluconic Acid (C) -0.4 +0.2 +0.6 +0.2 N.D.
stress D-Cycloserine 0.05 mg/ml -0.4 -0.3 -0.2 +1.5 N.D.
phage phage 93.1 -0.1 -0.1 +0.7 +0.3 N.D.
stress Nickel (II) chloride 0.6 mM +0.1 +0.6 +0.6 -0.4 N.D.
carbon source D,L-Lactate (C) +0.2 +0.0 +1.0 -0.1 N.D.
nitrogen source Uridine (N) +0.2 +0.4 +0.6 +0.4 N.D.
nitrogen source Ammonium chloride (N) -0.1 +0.8 +0.9 +0.8 N.D.
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