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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3240 and Ac3H11_3241 overlap by 4 nucleotides
Ac3H11_3241 and Ac3H11_3242 are separated by 168 nucleotides
Ac3H11_3242 and Ac3H11_3243 are separated by 207 nucleotides
Ac3H11_3243 and Ac3H11_3244 are separated by 68 nucleotides
Ac3H11_3240 - Anthranilate phosphoribosyltransferase like (EC 2.4.2.18), at 151,053 to 151,976
_3240
Ac3H11_3241 - Uroporphyrinogen-III methyltransferase (EC 2.1.1.107), at 151,973 to 152,797
_3241
Ac3H11_3242 - Methyl-accepting chemotaxis protein, at 152,966 to 153,676
_3242
Ac3H11_3243 - Endoglucanase (EC 3.2.1.4), at 153,884 to 155,359
_3243
Ac3H11_3244 - cytosolic long-chain acyl-CoA thioester hydrolase family protein, at 155,428 to 155,916
_3244
Group
Condition
Ac3H11
_3240
Ac3H11
_3241
Ac3H11
_3242
Ac3H11
_3243
Ac3H11
_3244
carbon source
L-Lactate (C)
-7.1
-4.7
-0.2
+0.0
+0.1
carbon source
L-Arabinose (C)
-4.4
-6.0
-0.2
-0.1
-0.2
carbon source
L-Arabinose (C)
-3.7
-6.2
+0.3
-0.0
-0.0
carbon source
D-Lactate (C)
-2.9
-5.9
-0.1
+0.1
-0.4
carbon source
D-Glucose (C)
-2.3
-6.1
-0.3
+0.0
-0.2
carbon source
pyruvate (C)
-3.7
-4.6
-0.1
+0.1
-0.3
carbon source
D-Fructose (C)
-2.3
-6.1
-0.4
+0.2
+0.1
carbon source
D-Galactose (C)
-2.6
-5.6
+0.0
+0.1
-0.2
carbon source
D-Galactose (C)
-2.7
-6.0
+0.2
-0.0
+0.4
carbon source
L-Lactate (C)
-2.7
-4.8
-0.5
+0.0
-0.2
carbon source
D-Galactose (C)
-1.6
-5.4
-0.6
-0.1
-0.1
carbon source
D-Fructose (C)
-2.5
-4.9
-0.2
-0.1
-0.0
carbon source
L-Asparagine (C)
-1.8
-4.9
-0.6
-0.1
-0.3
carbon source
pyruvate (C)
-1.9
-5.7
-0.0
+0.2
-0.2
carbon source
D-Glucose (C)
-3.3
-3.9
-0.0
-0.1
-0.2
carbon source
D-Sorbitol (C)
-1.4
-5.6
-0.5
-0.1
+0.1
carbon source
L-Glutamine (C)
-1.4
-5.3
-0.6
+0.0
-0.1
nitrogen source
Ammonium chloride (N)
-3.3
-3.8
-0.0
+0.0
-0.2
nitrogen source
L-Histidine (N)
-2.1
-5.2
-0.3
-0.0
+0.5
carbon source
D,L-Lactate (C)
-2.5
-3.8
-0.4
+0.2
-0.5
carbon source
D-Mannose (C)
-1.2
-5.2
-0.5
-0.1
-0.0
carbon source
D-Lactate (C)
-2.0
-4.3
-0.6
-0.0
+0.0
carbon source
Glycerol (C)
-1.2
-5.4
-0.2
-0.1
+0.0
carbon source
D-Fructose (C)
-2.5
-4.0
-0.1
+0.0
-0.2
carbon source
Tween 20 (C)
-2.4
-4.1
-0.2
-0.1
+0.0
carbon source
D-Ribose (C)
-0.8
-5.8
+0.1
+0.0
-0.1
carbon source
D-Ribose (C)
-0.6
-6.0
+0.0
+0.2
-0.0
carbon source
L-Malic (C)
-0.6
-5.4
-0.5
+0.1
-0.0
carbon source
D,L-Lactate (C)
-1.4
-4.6
+0.0
+0.1
-0.3
stress
D-Cycloserine 0.05 mg/ml
+5.9
+7.2
-0.7
+0.0
-0.4
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