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Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3194 and Ac3H11_3195 are separated by 143 nucleotides
Ac3H11_3195 and Ac3H11_3196 are separated by 302 nucleotides
Ac3H11_3196 and Ac3H11_3197 are separated by 128 nucleotides
Ac3H11_3197 and Ac3H11_3198 are separated by 1027 nucleotides
Ac3H11_3194 - FIG022979: MoxR-like ATPases, at 96,028 to 96,948
_3194
Ac3H11_3195 - FIG002343: hypothetical protein, at 97,092 to 98,126
_3195
Ac3H11_3196 - FIG001454: Transglutaminase-like enzymes, putative cysteine proteases, at 98,429 to 100,477
_3196
Ac3H11_3197 - Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-), at 100,606 to 101,565
_3197
Ac3H11_3198 - Periplasmic binding protein, at 102,593 to 103,546
_3198
Group
Condition
Ac3H11
_3194
Ac3H11
_3195
Ac3H11
_3196
Ac3H11
_3197
Ac3H11
_3198
carbon source
succinate (C)
+0.1
-0.3
-0.3
-0.5
-0.6
stress
Nickel (II) chloride 0.6 mM
-0.4
-0.2
-0.3
+0.3
-0.1
stress
Bacitracin 0.032 mg/ml
+0.1
+0.4
-0.4
-0.3
-0.4
motility
inner cut, R2A soft agar motility assay
-0.0
+0.0
+0.2
-1.0
+0.3
stress
sodium fluoride 25 mM
-0.2
-0.0
-0.4
+0.4
-0.3
pH
LB, pH10
-0.8
+0.2
-0.1
+0.7
-0.1
nitrogen source
L-Leucine (N)
-0.4
-0.3
+0.3
+0.0
+0.2
stress
Paraquat dichloride 0.01 mg/ml
+0.3
-0.1
-0.3
+0.4
-0.3
stress
perchlorate 10 mM
-0.7
+0.2
+0.2
+0.4
-0.2
stress
Cisplatin 0.0025 mg/ml
-0.2
+0.2
-0.0
+0.7
-0.7
stress
Phosphomycin 0.06 mg/ml
-0.2
+0.2
-0.3
+0.1
+0.3
lb
LB
-0.2
+0.1
-0.1
+0.6
-0.4
lb
LB
-0.1
-0.1
+0.1
+0.7
-0.4
stress
nitrite 10 mM
-0.1
+0.2
+0.0
+0.4
-0.3
stress
Chlorate 20 mM
-0.2
+0.2
-0.4
+0.6
+0.1
stress
Sisomicin 0.0005 mg/ml
-0.2
+0.2
-0.1
+0.7
-0.2
nitrogen source
L-Isoleucine (N)
-0.2
-0.5
+0.2
+0.5
+0.5
carbon source
D-Ribose (C)
+0.6
+0.1
-0.3
+0.2
-0.1
stress
D-Cycloserine 0.05 mg/ml
+0.3
-0.4
+0.4
+0.4
-0.1
phage
phage 93.1
+0.1
-0.3
-0.2
+0.8
+0.1
nitrogen source
L-Alanine (N)
-0.0
+0.2
+0.3
+0.6
-0.3
carbon source
D-Gluconic Acid (C)
+0.3
+0.0
+0.3
+0.7
-0.4
stress
Phosphomycin 0.02 mg/ml
-0.3
+0.3
+0.1
+0.5
+0.3
stress
Cobalt chloride 0.32 mM
+0.1
-0.1
+0.1
+0.9
+0.1
stress
Cobalt chloride 0.4 mM
+0.2
+0.2
+0.2
-0.2
+0.8
nitrogen source
D-Alanine (N)
+0.2
-0.3
+0.4
+0.4
+0.5
motility
inner cut, R2A soft agar motility assay
+0.5
+0.3
+0.2
+0.2
+0.0
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.2
+0.3
+0.0
+0.7
+0.1
stress
Cisplatin 0.005 mg/ml
+0.4
+0.6
-0.7
+0.7
+0.6
carbon source
D-Gluconic Acid (C)
+0.3
-0.0
+0.2
+0.9
+0.4
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