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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3165 and Ac3H11_3166 are separated by 317 nucleotides
Ac3H11_3166 and Ac3H11_3167 are separated by 71 nucleotides
Ac3H11_3167 and Ac3H11_3168 are separated by 46 nucleotides
Ac3H11_3168 and Ac3H11_3169 are separated by 196 nucleotides
Ac3H11_3165 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 66,536 to 69,196
_3165
Ac3H11_3166 - HD domain protein, at 69,514 to 70,398
_3166
Ac3H11_3167 - Signal transduction histidine kinase, at 70,470 to 71,399
_3167
Ac3H11_3168 - Response regulator, at 71,446 to 72,759
_3168
Ac3H11_3169 - hypothetical protein, at 72,956 to 73,075
_3169
Group
Condition
Ac3H11
_3165
Ac3H11
_3166
Ac3H11
_3167
Ac3H11
_3168
Ac3H11
_3169
nitrogen source
L-Alanine (N)
-0.0
-0.2
+0.1
-0.2
-4.4
nitrogen source
D-Alanine (N)
+0.2
-0.2
-0.2
+0.2
-4.4
stress
Bacitracin 0.032 mg/ml
-0.1
-0.1
-0.1
+0.0
-3.4
carbon source
a-Ketoglutaric (C)
+0.1
+0.0
+0.0
+0.1
-3.2
stress
Bacitracin 0.008 mg/ml
+0.0
+0.1
+0.1
+0.4
-3.6
stress
Fusidic 0.001 mg/ml
+0.1
-0.0
+0.0
-0.2
-2.8
stress
Bacitracin 0.016 mg/ml
-0.1
+0.2
-0.1
+0.0
-2.8
motility
inner cut, R2A soft agar motility assay
+0.3
+0.2
+0.4
-0.0
-3.1
stress
Tetracycline 0.0001 mg/ml
+0.1
+0.1
+0.1
+0.1
-2.7
carbon source
D-Gluconic Acid (C)
+0.1
-0.0
+0.2
+0.1
-2.3
stress
Cobalt chloride 0.32 mM
+0.1
+0.1
-0.1
-0.0
-1.7
nitrogen source
Uridine (N)
+0.1
+0.2
-0.2
+0.1
-1.3
stress
Nickel (II) chloride 0.8 mM
-0.0
+0.1
+0.3
-0.1
-1.5
motility
inner cut, R2A soft agar motility assay
+0.1
+0.2
+0.2
+0.1
-1.8
stress
Thallium(I) acetate 0.0006 mg/ml
+0.1
+0.4
-0.0
+0.3
-1.2
carbon source
D-Lactate (C)
+0.1
+0.3
+0.1
+0.3
-1.2
carbon source
succinate (C)
+0.2
+0.3
+0.2
+0.4
-0.9
stress
Cisplatin 0.005 mg/ml
+0.2
+0.1
+0.5
+0.7
-0.9
stress
Nickel (II) chloride 0.6 mM
-0.0
-0.4
+0.1
+0.3
+1.9
stress
nitrite 10 mM
-0.1
+0.0
+0.0
+0.1
+1.8
stress
Aluminum chloride 4 mM
+0.0
+0.1
+0.2
+0.1
+1.4
carbon source
L-Lactate (C)
+0.2
+0.2
+0.4
+0.3
+0.9
lb
LB
+0.0
+0.6
+0.3
+0.1
+1.1
stress
copper (II) chloride 2 mM
+0.1
+0.4
+0.2
+0.0
+1.5
lb
LB
-0.0
-0.1
+0.3
+0.3
+1.7
stress
Chlorite 0.1 mM
+0.1
-0.1
+0.2
-0.2
+2.4
pH
LB, pH10
+0.1
-0.1
-0.1
+0.7
+1.7
stress
perchlorate 10 mM
+0.1
+0.2
+0.2
+0.2
+1.8
stress
Cisplatin 0.0025 mg/ml
-0.1
+0.3
+0.1
+0.2
+2.1
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.1
+0.2
+0.4
+0.4
+3.4
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