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Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_3152 and Ac3H11_3153 are separated by 18 nucleotides
Ac3H11_3153 and Ac3H11_3154 are separated by 33 nucleotides
Ac3H11_3154 and Ac3H11_3155 are separated by 80 nucleotides
Ac3H11_3155 and Ac3H11_3156 are separated by 134 nucleotides
Ac3H11_3152 - Citrate lyase beta chain (EC 4.1.3.6), at 54,928 to 56,022
_3152
Ac3H11_3153 - Malate dehydrogenase (EC 1.1.1.37), at 56,041 to 57,027
_3153
Ac3H11_3154 - hypothetical protein, at 57,061 to 57,174
_3154
Ac3H11_3155 - Putative alkanesulfonate metabolism utilization regulator, at 57,255 to 58,043
_3155
Ac3H11_3156 - Succinate dehydrogenase cytochrome b-556 subunit, at 58,178 to 58,612
_3156
Group
Condition
Ac3H11
_3152
Ac3H11
_3153
Ac3H11
_3154
Ac3H11
_3155
Ac3H11
_3156
nitrogen source
L-Alanine (N)
-0.4
N.D.
-5.5
-1.6
N.D.
nitrogen source
D-Alanine (N)
-0.0
N.D.
-5.6
-1.5
N.D.
stress
nitrite 10 mM
-0.9
N.D.
-3.2
-1.9
N.D.
nitrogen source
L-Leucine (N)
-0.6
N.D.
-1.6
-2.4
N.D.
nitrogen source
L-Isoleucine (N)
+0.6
N.D.
-3.3
-1.5
N.D.
nitrogen source
Ammonium chloride (N)
+0.9
N.D.
-3.9
-1.2
N.D.
stress
perchlorate 10 mM
-1.1
N.D.
-2.2
-0.7
N.D.
stress
Cobalt chloride 0.32 mM
-1.0
N.D.
-0.2
-2.7
N.D.
stress
Cobalt chloride 0.16 mM
-0.5
N.D.
-0.8
-2.6
N.D.
lb
LB
-0.7
N.D.
-1.4
-1.7
N.D.
nitrogen source
Uridine (N)
+0.1
N.D.
-0.9
-2.9
N.D.
nitrogen source
L-Threonine (N)
-1.3
N.D.
-1.9
-0.3
N.D.
stress
A22 0.025 mg/ml
-0.6
N.D.
-2.1
-0.9
N.D.
stress
Nickel (II) chloride 0.6 mM
-0.2
N.D.
-1.8
-1.5
N.D.
stress
nitrite 10 mM
-2.6
N.D.
-0.8
-0.0
N.D.
nitrogen source
L-Arginine (N)
+0.1
N.D.
-0.8
-2.1
N.D.
stress
Sisomicin 0.0005 mg/ml
-0.6
N.D.
-1.0
-1.2
N.D.
stress
Nickel (II) chloride 0.8 mM
-1.0
N.D.
-1.7
+0.1
N.D.
nitrogen source
L-Glutamine (N)
+0.4
N.D.
-0.7
-2.2
N.D.
stress
Cobalt chloride 0.32 mM
-0.3
N.D.
+0.1
-2.3
N.D.
carbon source
Tween 20 (C)
+0.2
N.D.
-1.1
-1.6
N.D.
nitrogen source
L-Histidine (N)
+0.5
N.D.
-0.5
-2.2
N.D.
carbon source
pyruvate (C)
+0.3
N.D.
+0.4
-2.0
N.D.
stress
Cisplatin 0.0025 mg/ml
-1.9
N.D.
+0.6
+0.5
N.D.
stress
Polymyxin B sulfate 0.0001 mg/ml
-1.2
N.D.
+1.3
-0.6
N.D.
carbon source
succinate (C)
-0.1
N.D.
+1.5
-1.2
N.D.
stress
Zinc 1 mM
-1.0
N.D.
+0.9
+0.9
N.D.
stress
copper (II) chloride 2 mM
-0.9
N.D.
+1.1
+2.7
N.D.
pH
LB, pH10
-1.0
N.D.
+3.5
+3.3
N.D.
pH
LB, pH10
+0.3
N.D.
+2.4
+3.6
N.D.
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