Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3121 and Ac3H11_3122 are separated by 140 nucleotidesAc3H11_3122 and Ac3H11_3123 are separated by 161 nucleotidesAc3H11_3123 and Ac3H11_3124 are separated by 95 nucleotidesAc3H11_3124 and Ac3H11_3125 overlap by 4 nucleotides Ac3H11_3121 - hypothetical protein, at 22,732 to 22,875 _3121 Ac3H11_3122 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 23,016 to 25,301 _3122 Ac3H11_3123 - 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF), at 25,463 to 26,443 _3123 Ac3H11_3124 - hypothetical protein, at 26,539 to 26,790 _3124 Ac3H11_3125 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 26,787 to 27,029 _3125
Group Condition Ac3H11_3121 Ac3H11_3122 Ac3H11_3123 Ac3H11_3124 Ac3H11_3125
motility inner cut, R2A soft agar motility assay N.D. +0.3 N.D. -1.8 -0.0
stress Sisomicin 0.001 mg/ml N.D. +0.1 N.D. -1.0 -0.4
stress D-Cycloserine 0.05 mg/ml N.D. -0.1 N.D. -1.0 -0.1
pH LB, pH5 N.D. +0.0 N.D. -1.0 -0.0
pH LB, pH6 N.D. +0.0 N.D. -0.4 -0.6
stress Cobalt chloride 0.32 mM N.D. +0.2 N.D. -1.0 -0.1
stress Bacitracin 0.008 mg/ml N.D. +0.0 N.D. -0.9 +0.0
carbon source pyruvate (C) N.D. +0.1 N.D. -0.9 +0.1
stress Aluminum chloride 2 mM N.D. -0.3 N.D. -0.5 +0.2
carbon source succinate (C) N.D. +0.2 N.D. -0.9 +0.1
carbon source pyruvate (C) N.D. -0.1 N.D. -0.7 +0.3
motility inner cut, R2A soft agar motility assay N.D. +0.1 N.D. -0.9 +0.3
carbon source a-Ketoglutaric (C) N.D. -0.0 N.D. -0.7 +0.4
stress Cephalothin 0.01 mg/ml N.D. +0.1 N.D. -0.6 +0.3
stress Doxycycline hyclate 0.000025 mg/ml N.D. +0.2 N.D. -0.6 +0.2
nitrogen source L-Threonine (N) N.D. +0.1 N.D. -0.6 +0.4
nitrogen source L-Isoleucine (N) N.D. +0.0 N.D. -0.3 +0.6
pH LB, pH10 N.D. +0.2 N.D. +0.5 -0.3
stress Polymyxin B sulfate 0.0001 mg/ml N.D. -0.1 N.D. +0.6 +0.3
stress Cobalt chloride 0.32 mM N.D. -0.2 N.D. +1.1 -0.2
stress Cisplatin 0.0025 mg/ml N.D. +0.3 N.D. -0.1 +0.7
lb LB N.D. -0.0 N.D. +0.8 +0.2
stress perchlorate 10 mM N.D. +0.3 N.D. +0.2 +0.5
carbon source D-Ribose (C) N.D. +0.0 N.D. +0.4 +0.5
stress syringaldehyde 2.5 mM N.D. +0.1 N.D. +0.4 +0.5
carbon source D-Fructose (C) N.D. +0.0 N.D. +0.5 +0.4
carbon source D-Glucose (C) N.D. +0.0 N.D. +0.7 +0.2
carbon source a-Ketoglutaric (C) N.D. +0.1 N.D. +0.7 +0.3
stress nitrite 10 mM N.D. +0.2 N.D. +0.7 +0.4
stress Cisplatin 0.005 mg/ml N.D. -0.2 N.D. +1.2 +0.6
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