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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_307 and Ac3H11_308 are separated by 6 nucleotides
Ac3H11_308 and Ac3H11_309 are separated by 207 nucleotides
Ac3H11_309 and Ac3H11_310 are separated by 42 nucleotides
Ac3H11_310 and Ac3H11_311 are separated by 383 nucleotides
Ac3H11_307 - TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA, at 128,503 to 129,021
_307
Ac3H11_308 - N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), at 129,028 to 130,491
_308
Ac3H11_309 - hypothetical protein, at 130,699 to 131,031
_309
Ac3H11_310 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 131,074 to 132,654
_310
Ac3H11_311 - hypothetical protein, at 133,038 to 133,157
_311
Group
Condition
Ac3H11
_307
Ac3H11
_308
Ac3H11
_309
Ac3H11
_310
Ac3H11
_311
phage
phage 93.1
N.D.
N.D.
N.D.
-0.3
N.D.
pH
LB, pH10
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
D,L-Lactate (C)
N.D.
N.D.
N.D.
-0.2
N.D.
stress
Cobalt chloride 0.32 mM
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
D-Galactose (C)
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
propionate (C)
N.D.
N.D.
N.D.
-0.1
N.D.
stress
Cisplatin 0.005 mg/ml
N.D.
N.D.
N.D.
-0.1
N.D.
stress
nitrite 10 mM
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
L-Lactate (C)
N.D.
N.D.
N.D.
-0.1
N.D.
stress
Fusidic 0.001 mg/ml
N.D.
N.D.
N.D.
+0.1
N.D.
stress
Paraquat dichloride 0.01 mg/ml
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
L-Lactate (C)
N.D.
N.D.
N.D.
+0.1
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
N.D.
+0.1
N.D.
nitrogen source
L-Arginine (N)
N.D.
N.D.
N.D.
+0.1
N.D.
stress
Chloramphenicol 0.0005 mg/ml
N.D.
N.D.
N.D.
+0.1
N.D.
nitrogen source
L-Phenylalanine (N)
N.D.
N.D.
N.D.
+0.1
N.D.
motility
inner cut, R2A soft agar motility assay
N.D.
N.D.
N.D.
+0.1
N.D.
pH
LB, pH9
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
L-Asparagine (C)
N.D.
N.D.
N.D.
+0.2
N.D.
stress
Chloramphenicol 0.001 mg/ml
N.D.
N.D.
N.D.
+0.2
N.D.
carbon source
D-Mannose (C)
N.D.
N.D.
N.D.
+0.2
N.D.
stress
nitrite 10 mM
N.D.
N.D.
N.D.
+0.2
N.D.
stress
Phosphomycin 0.06 mg/ml
N.D.
N.D.
N.D.
+0.2
N.D.
stress
Aluminum chloride 2 mM
N.D.
N.D.
N.D.
+0.2
N.D.
stress
copper (II) chloride 2 mM
N.D.
N.D.
N.D.
+0.2
N.D.
lb
LB
N.D.
N.D.
N.D.
+0.2
N.D.
stress
Cisplatin 0.0025 mg/ml
N.D.
N.D.
N.D.
+0.2
N.D.
stress
perchlorate 25 mM
N.D.
N.D.
N.D.
+0.3
N.D.
nitrogen source
Ammonium chloride (N)
N.D.
N.D.
N.D.
+0.3
N.D.
lb
LB
N.D.
N.D.
N.D.
+0.3
N.D.
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