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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3072 and Ac3H11_3073 are separated by 1833 nucleotides
Ac3H11_3073 and Ac3H11_3074 are separated by 813 nucleotides
Ac3H11_3074 and Ac3H11_3075 are separated by 193 nucleotides
Ac3H11_3075 and Ac3H11_3076 are separated by 55 nucleotides
Ac3H11_3072 - Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16), at 94,235 to 96,160
_3072
Ac3H11_3073 - FMN-dependent NADH-azoreductase, at 97,994 to 98,569
_3073
Ac3H11_3074 - hypothetical protein, at 99,383 to 99,502
_3074
Ac3H11_3075 - hypothetical protein, at 99,696 to 99,809
_3075
Ac3H11_3076 - Antibiotic biosynthesis monooxygenase, at 99,865 to 100,164
_3076
Group
Condition
Ac3H11
_3072
Ac3H11
_3073
Ac3H11
_3074
Ac3H11
_3075
Ac3H11
_3076
stress
sodium fluoride 20 mM
N.D.
+0.1
-0.1
-1.3
-1.1
phage
phage 93.1
N.D.
-0.0
-0.0
-0.2
-1.1
lb
LB
N.D.
-0.2
-0.0
-0.7
-0.3
stress
copper (II) chloride 1 mM
N.D.
+0.1
-0.2
+0.3
-1.4
motility
inner cut, R2A soft agar motility assay
N.D.
-0.0
+0.3
-0.9
-0.5
stress
D-Cycloserine 0.05 mg/ml
N.D.
+0.2
+0.3
+0.0
-1.6
lb
LB
N.D.
+0.1
+0.0
-0.2
-0.9
stress
nitrate 45 mM
N.D.
+0.1
+0.3
-0.7
-0.5
nitrogen source
L-Alanine (N)
N.D.
+0.1
-0.1
+0.4
-1.2
stress
nitrate 20 mM
N.D.
-0.0
+0.1
-1.0
+0.3
stress
Aluminum chloride 4 mM
N.D.
+0.0
-0.1
+0.3
-1.0
phage
phage 93.1
N.D.
+0.1
-0.2
+0.3
-0.9
carbon source
propionate (C)
N.D.
+0.1
+0.0
+0.2
-0.9
nitrogen source
D-Alanine (N)
N.D.
+0.1
-0.4
-1.4
+1.1
carbon source
D-Glucose (C)
N.D.
+0.1
+0.0
+0.3
-0.8
stress
Cisplatin 0.005 mg/ml
N.D.
+0.2
-0.2
+0.8
-0.8
carbon source
L-Lactate (C)
N.D.
+0.2
+0.0
-0.6
+0.5
motility
inner cut, R2A soft agar motility assay
N.D.
+0.0
+0.2
-1.1
+1.1
stress
Cobalt chloride 0.32 mM
N.D.
+0.1
-0.1
-0.5
+0.7
carbon source
D-Galactose (C)
N.D.
-0.0
+0.3
-0.3
+0.6
stress
Phosphomycin 0.06 mg/ml
N.D.
+0.2
+0.1
+0.9
-0.2
nitrogen source
L-Threonine (N)
N.D.
+0.1
+0.4
+0.7
-0.1
carbon source
D-Ribose (C)
N.D.
+0.1
-0.1
+0.7
+0.4
stress
Cisplatin 0.0025 mg/ml
N.D.
+0.1
+0.2
-0.4
+1.3
phage
phage 93.2
N.D.
-0.1
-0.6
+2.0
-0.0
nitrogen source
L-Isoleucine (N)
N.D.
+0.0
+0.3
-0.3
+1.3
carbon source
L-Lactate (C)
N.D.
+0.3
+0.1
+0.8
+0.2
nitrogen source
Ammonium chloride (N)
N.D.
+0.2
+0.6
+0.8
-0.3
carbon source
D-Lactate (C)
N.D.
+0.1
+0.0
+0.6
+0.7
stress
Paraquat dichloride 0.01 mg/ml
N.D.
+0.1
+0.2
+0.4
+1.3
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