Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_2990 and Ac3H11_2991 are separated by 38 nucleotidesAc3H11_2991 and Ac3H11_2992 are separated by 53 nucleotidesAc3H11_2992 and Ac3H11_2993 are separated by 44 nucleotidesAc3H11_2993 and Ac3H11_2994 are separated by 58 nucleotides Ac3H11_2990 - Phenylacetic acid degradation protein PaaD, thioesterase, at 7,573 to 7,911 _2990 Ac3H11_2991 - Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data), at 7,950 to 9,140 _2991 Ac3H11_2992 - Carbonic anhydrase (EC 4.2.1.1), at 9,194 to 9,853 _2992 Ac3H11_2993 - Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-), at 9,898 to 11,703 _2993 Ac3H11_2994 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (from data), at 11,762 to 12,955 _2994
Group Condition Ac3H11_2990 Ac3H11_2991 Ac3H11_2992 Ac3H11_2993 Ac3H11_2994
nitrogen source L-Leucine (N) -4.7 -6.2 -2.1 -0.1 +0.1
nitrogen source L-Isoleucine (N) -1.3 -1.3 -5.0 -1.9 -3.0
nitrogen source L-Threonine (N) -0.9 -0.5 -2.2 -0.8 -1.9
nitrogen source L-Alanine (N) -2.3 -0.0 -1.1 -0.1 +0.2
lb LB -1.0 +0.0 -2.2 +0.1 +0.7
temperature LB 30C -0.3 -1.3 -0.2 +0.1 -0.5
stress Phosphomycin 0.06 mg/ml -0.6 +0.2 -2.4 +0.2 +0.7
stress syringaldehyde 2.5 mM -0.7 -1.2 +0.4 +0.1 -0.4
stress copper (II) chloride 1 mM +0.3 +0.4 -2.8 +0.2 +0.4
stress Bacitracin 0.008 mg/ml +0.3 -0.0 -2.4 +0.2 +0.6
stress nitrite 10 mM -0.2 -0.0 -2.0 +0.2 +0.8
nitrogen source D-Alanine (N) -0.1 +0.3 -1.3 -0.2 +0.3
stress Zinc 1 mM +0.2 +0.1 -2.1 +0.2 +0.6
stress A22 0.025 mg/ml -0.3 -0.5 -0.9 +0.1 +0.6
stress Phosphomycin 0.02 mg/ml -0.2 +0.1 -1.6 +0.2 +0.7
stress Chlorite 0.1 mM -0.1 +0.2 -1.9 +0.2 +0.8
stress Nickel (II) chloride 0.6 mM +0.0 +0.2 -1.8 +0.0 +0.8
stress Sisomicin 0.001 mg/ml +0.5 +0.0 -1.9 +0.1 +0.6
stress Cisplatin 0.0025 mg/ml +0.4 +0.1 -1.8 +0.1 +0.4
lb LB +0.3 -0.0 -1.6 +0.3 +0.4
stress Cisplatin 0.005 mg/ml +0.5 +0.1 -1.8 +0.0 +0.6
stress Aluminum chloride 2 mM +0.4 -0.1 -1.3 +0.1 +0.3
pH LB, pH10 -0.7 -0.9 +0.9 +0.2 +0.3
stress perchlorate 25 mM +0.5 +0.3 -1.9 +0.3 +0.7
lb LB +1.0 -0.0 -1.9 +0.3 +0.9
stress Paraquat dichloride 0.01 mg/ml +0.8 -0.0 -1.7 +0.0 +1.2
stress Bacitracin 0.032 mg/ml +0.8 +0.0 -1.1 +0.2 +0.5
pH LB, pH10 -0.1 -0.7 +0.7 +0.1 +0.8
stress perchlorate 10 mM +0.8 +0.2 -1.2 +0.2 +0.9
stress copper (II) chloride 2 mM +0.4 +0.4 -0.8 +0.2 +1.1
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