Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_2988 and Ac3H11_2989 are separated by 107 nucleotidesAc3H11_2989 and Ac3H11_2990 are separated by 165 nucleotidesAc3H11_2990 and Ac3H11_2991 are separated by 38 nucleotidesAc3H11_2991 and Ac3H11_2992 are separated by 53 nucleotides Ac3H11_2988 - SoxH protein, homolog, at 5,768 to 6,886 _2988 Ac3H11_2989 - Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family, at 6,994 to 7,407 _2989 Ac3H11_2990 - Phenylacetic acid degradation protein PaaD, thioesterase, at 7,573 to 7,911 _2990 Ac3H11_2991 - Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data), at 7,950 to 9,140 _2991 Ac3H11_2992 - Carbonic anhydrase (EC 4.2.1.1), at 9,194 to 9,853 _2992
Group Condition Ac3H11_2988 Ac3H11_2989 Ac3H11_2990 Ac3H11_2991 Ac3H11_2992
nitrogen source L-Leucine (N) -0.0 +0.1 -4.7 -6.2 -2.1
nitrogen source L-Isoleucine (N) -0.0 +0.8 -1.3 -1.3 -5.0
nitrogen source L-Threonine (N) +0.1 -0.0 -0.9 -0.5 -2.2
nitrogen source L-Alanine (N) -0.1 -0.0 -2.3 -0.0 -1.1
lb LB +0.1 +0.2 -1.0 +0.0 -2.2
stress Phosphomycin 0.06 mg/ml +0.2 +0.4 -0.6 +0.2 -2.4
stress Bacitracin 0.008 mg/ml +0.1 +0.0 +0.3 -0.0 -2.4
temperature LB 30C +0.1 +0.0 -0.4 -1.1 -0.3
stress Phosphomycin 0.02 mg/ml +0.0 +0.1 -0.2 +0.1 -1.6
stress syringaldehyde 2.5 mM +0.0 -0.2 -0.7 -1.2 +0.4
stress nitrite 10 mM +0.3 +0.5 -0.2 -0.0 -2.0
stress copper (II) chloride 1 mM +0.4 +0.4 +0.3 +0.4 -2.8
stress Nickel (II) chloride 0.6 mM +0.1 +0.1 +0.0 +0.2 -1.8
stress A22 0.025 mg/ml +0.1 +0.3 -0.3 -0.5 -0.9
stress Zinc 1 mM +0.3 +0.3 +0.2 +0.1 -2.1
stress Cisplatin 0.0025 mg/ml -0.2 +0.2 +0.4 +0.1 -1.8
stress Chlorite 0.1 mM +0.2 +0.5 -0.1 +0.2 -1.9
lb LB +0.1 +0.1 +0.3 -0.0 -1.6
stress Cisplatin 0.005 mg/ml -0.1 +0.3 +0.5 +0.1 -1.8
stress Sisomicin 0.001 mg/ml +0.0 +0.4 +0.5 +0.0 -1.9
lb LB +0.1 +0.2 +1.0 -0.0 -1.9
nitrogen source Ammonium chloride (N) +0.2 -0.8 +0.1 +0.6 -0.7
nitrogen source Uridine (N) -0.2 -0.4 +0.5 +0.3 -0.9
stress Paraquat dichloride 0.01 mg/ml +0.2 +0.2 +0.8 -0.0 -1.7
stress perchlorate 25 mM +0.2 +0.3 +0.5 +0.3 -1.9
stress Aluminum chloride 2 mM +0.2 +0.2 +0.4 -0.1 -1.3
stress Bacitracin 0.032 mg/ml +0.0 +0.1 +0.8 +0.0 -1.1
pH LB, pH10 +0.2 +0.4 -0.7 -0.9 +0.9
stress perchlorate 10 mM +0.2 +0.0 +0.8 +0.2 -1.2
stress copper (II) chloride 2 mM +0.2 +0.9 +0.4 +0.4 -0.8
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