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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_2960 and Ac3H11_2961 are separated by 95 nucleotides
Ac3H11_2961 and Ac3H11_2962 are separated by 4 nucleotides
Ac3H11_2962 and Ac3H11_2963 are separated by 45 nucleotides
Ac3H11_2963 and Ac3H11_2964 are separated by 176 nucleotides
Ac3H11_2960 - Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1) / ADP-ribose pyrophosphatase (EC 3.6.1.13), at 1,282,406 to 1,283,452
_2960
Ac3H11_2961 - NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase, at 1,283,548 to 1,285,248
_2961
Ac3H11_2962 - Nicotinate phosphoribosyltransferase (EC 2.4.2.11), at 1,285,253 to 1,286,461
_2962
Ac3H11_2963 - Nicotinamidase (EC 3.5.1.19), at 1,286,507 to 1,287,349
_2963
Ac3H11_2964 - Nudix-related transcriptional regulator NrtR, at 1,287,526 to 1,288,203
_2964
Group
Condition
Ac3H11
_2960
Ac3H11
_2961
Ac3H11
_2962
Ac3H11
_2963
Ac3H11
_2964
carbon source
L-Arabinose (C)
-4.9
-0.4
-0.7
-0.4
N.D.
nitrogen source
L-Alanine (N)
-4.4
-0.4
-0.3
-0.7
N.D.
carbon source
Glycerol (C)
-4.4
-0.3
-0.4
-0.5
N.D.
carbon source
Tween 20 (C)
-4.5
-0.4
-0.0
-0.6
N.D.
carbon source
L-Arabinose (C)
-4.4
-0.4
-0.3
-0.3
N.D.
carbon source
L-Arabinose (C)
-4.7
-0.4
-0.4
+0.1
N.D.
carbon source
D-Lactate (C)
-4.6
-0.3
-0.3
-0.1
N.D.
nitrogen source
L-Proline (N)
-4.6
-0.2
-0.0
-0.3
N.D.
carbon source
propionate (C)
-4.5
-0.2
-0.3
-0.0
N.D.
nitrogen source
L-Threonine (N)
-4.5
-0.2
-0.1
-0.2
N.D.
stress
Nickel (II) chloride 0.8 mM
-4.4
+0.0
+0.1
-0.7
N.D.
stress
nitrate 100 mM
-4.2
-0.1
-0.0
-0.6
N.D.
stress
Cisplatin 0.005 mg/ml
-4.2
-0.6
-0.5
+0.3
N.D.
nitrogen source
L-Isoleucine (N)
-4.5
-0.2
+0.0
-0.2
N.D.
stress
Nickel (II) chloride 0.6 mM
-4.4
+0.2
-0.5
-0.1
N.D.
lb
LB
-4.4
-0.3
-0.0
-0.0
N.D.
lb
LB
-4.2
-0.1
-0.0
-0.4
N.D.
stress
Chlorite 0.1 mM
-4.1
-0.2
-0.0
-0.3
N.D.
lb
LB
-4.1
-0.1
-0.1
-0.2
N.D.
carbon source
L-Lactate (C)
-3.0
-0.3
-0.7
-0.5
N.D.
stress
Bacitracin 0.008 mg/ml
-4.0
+0.1
-0.2
-0.2
N.D.
carbon source
a-Ketoglutaric (C)
-3.3
-0.5
-0.5
-0.1
N.D.
stress
Bacitracin 0.016 mg/ml
-3.9
-0.1
-0.4
+0.2
N.D.
carbon source
D-Lactate (C)
-3.2
-0.4
-0.3
-0.4
N.D.
carbon source
D,L-Lactate (C)
-3.0
-0.3
-0.5
-0.3
N.D.
motility
inner cut, R2A soft agar motility assay
-3.5
-0.4
-0.2
+0.3
N.D.
stress
Cisplatin 0.0025 mg/ml
-2.8
+0.1
-0.6
-0.5
N.D.
stress
Sisomicin 0.001 mg/ml
-4.1
+0.1
+0.2
+0.2
N.D.
nitrogen source
Uridine (N)
-2.8
+0.2
+0.1
-0.9
N.D.
stress
D-Cycloserine 0.05 mg/ml
+7.5
-0.4
+0.9
-1.4
N.D.
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