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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_2958 and Ac3H11_2959 are separated by 217 nucleotides
Ac3H11_2959 and Ac3H11_2960 are separated by 35 nucleotides
Ac3H11_2960 and Ac3H11_2961 are separated by 95 nucleotides
Ac3H11_2961 and Ac3H11_2962 are separated by 4 nucleotides
Ac3H11_2958 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 1,278,563 to 1,280,086
_2958
Ac3H11_2959 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 1,280,304 to 1,282,370
_2959
Ac3H11_2960 - Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1) / ADP-ribose pyrophosphatase (EC 3.6.1.13), at 1,282,406 to 1,283,452
_2960
Ac3H11_2961 - NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase, at 1,283,548 to 1,285,248
_2961
Ac3H11_2962 - Nicotinate phosphoribosyltransferase (EC 2.4.2.11), at 1,285,253 to 1,286,461
_2962
Group
Condition
Ac3H11
_2958
Ac3H11
_2959
Ac3H11
_2960
Ac3H11
_2961
Ac3H11
_2962
carbon source
L-Arabinose (C)
-0.1
-0.3
-4.9
-0.4
-0.7
carbon source
L-Arabinose (C)
-0.1
-0.4
-4.7
-0.4
-0.4
carbon source
L-Arabinose (C)
-0.5
-0.4
-4.4
-0.4
-0.3
carbon source
Glycerol (C)
-0.4
-0.3
-4.4
-0.3
-0.4
carbon source
D-Lactate (C)
-0.2
-0.5
-4.6
-0.3
-0.3
carbon source
Tween 20 (C)
-0.5
-0.3
-4.5
-0.4
-0.0
nitrogen source
L-Threonine (N)
-0.2
-0.5
-4.5
-0.2
-0.1
stress
Nickel (II) chloride 0.6 mM
+0.3
-1.0
-4.4
+0.2
-0.5
nitrogen source
L-Proline (N)
-0.2
-0.4
-4.6
-0.2
-0.0
carbon source
propionate (C)
-0.2
-0.1
-4.5
-0.2
-0.3
nitrogen source
L-Alanine (N)
+0.1
-0.1
-4.4
-0.4
-0.3
nitrogen source
L-Isoleucine (N)
-0.2
-0.2
-4.5
-0.2
+0.0
lb
LB
-0.1
-0.2
-4.4
-0.3
-0.0
stress
Cisplatin 0.005 mg/ml
+0.3
+0.0
-4.2
-0.6
-0.5
stress
Bacitracin 0.016 mg/ml
+0.0
-0.5
-3.9
-0.1
-0.4
carbon source
a-Ketoglutaric (C)
-0.3
-0.2
-3.3
-0.5
-0.5
carbon source
L-Lactate (C)
-0.2
-0.5
-3.0
-0.3
-0.7
stress
nitrate 100 mM
-0.5
+0.0
-4.2
-0.1
-0.0
carbon source
D,L-Lactate (C)
-0.4
-0.5
-3.0
-0.3
-0.5
nitrogen source
L-Leucine (N)
-0.4
-1.0
-3.0
-0.2
-0.0
lb
LB
+0.1
-0.3
-4.1
-0.1
-0.1
stress
Nickel (II) chloride 0.8 mM
-0.1
-0.2
-4.4
+0.0
+0.1
stress
Bacitracin 0.008 mg/ml
-0.0
-0.3
-4.0
+0.1
-0.2
carbon source
D-Lactate (C)
-0.4
-0.3
-3.2
-0.4
-0.3
stress
Chlorite 0.1 mM
+0.0
+0.1
-4.1
-0.2
-0.0
motility
inner cut, R2A soft agar motility assay
+0.1
-0.2
-3.5
-0.4
-0.2
lb
LB
+0.4
-0.0
-4.2
-0.1
-0.0
stress
Sisomicin 0.001 mg/ml
+0.1
-0.3
-4.1
+0.1
+0.2
nitrogen source
Uridine (N)
-0.4
-0.7
-2.8
+0.2
+0.1
stress
D-Cycloserine 0.05 mg/ml
-0.3
+0.1
+7.5
-0.4
+0.9
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