Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_2958 and Ac3H11_2959 are separated by 217 nucleotidesAc3H11_2959 and Ac3H11_2960 are separated by 35 nucleotidesAc3H11_2960 and Ac3H11_2961 are separated by 95 nucleotidesAc3H11_2961 and Ac3H11_2962 are separated by 4 nucleotides Ac3H11_2958 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 1,278,563 to 1,280,086 _2958 Ac3H11_2959 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 1,280,304 to 1,282,370 _2959 Ac3H11_2960 - Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1) / ADP-ribose pyrophosphatase (EC 3.6.1.13), at 1,282,406 to 1,283,452 _2960 Ac3H11_2961 - NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase, at 1,283,548 to 1,285,248 _2961 Ac3H11_2962 - Nicotinate phosphoribosyltransferase (EC 2.4.2.11), at 1,285,253 to 1,286,461 _2962
Group Condition Ac3H11_2958 Ac3H11_2959 Ac3H11_2960 Ac3H11_2961 Ac3H11_2962
carbon source L-Arabinose (C) -0.1 -0.3 -4.9 -0.4 -0.7
carbon source L-Arabinose (C) -0.1 -0.4 -4.7 -0.4 -0.4
carbon source L-Arabinose (C) -0.5 -0.4 -4.4 -0.4 -0.3
carbon source Glycerol (C) -0.4 -0.3 -4.4 -0.3 -0.4
carbon source D-Lactate (C) -0.2 -0.5 -4.6 -0.3 -0.3
carbon source Tween 20 (C) -0.5 -0.3 -4.5 -0.4 -0.0
nitrogen source L-Threonine (N) -0.2 -0.5 -4.5 -0.2 -0.1
stress Nickel (II) chloride 0.6 mM +0.3 -1.0 -4.4 +0.2 -0.5
nitrogen source L-Proline (N) -0.2 -0.4 -4.6 -0.2 -0.0
carbon source propionate (C) -0.2 -0.1 -4.5 -0.2 -0.3
nitrogen source L-Alanine (N) +0.1 -0.1 -4.4 -0.4 -0.3
nitrogen source L-Isoleucine (N) -0.2 -0.2 -4.5 -0.2 +0.0
lb LB -0.1 -0.2 -4.4 -0.3 -0.0
stress Cisplatin 0.005 mg/ml +0.3 +0.0 -4.2 -0.6 -0.5
stress Bacitracin 0.016 mg/ml +0.0 -0.5 -3.9 -0.1 -0.4
carbon source a-Ketoglutaric (C) -0.3 -0.2 -3.3 -0.5 -0.5
carbon source L-Lactate (C) -0.2 -0.5 -3.0 -0.3 -0.7
stress nitrate 100 mM -0.5 +0.0 -4.2 -0.1 -0.0
carbon source D,L-Lactate (C) -0.4 -0.5 -3.0 -0.3 -0.5
nitrogen source L-Leucine (N) -0.4 -1.0 -3.0 -0.2 -0.0
lb LB +0.1 -0.3 -4.1 -0.1 -0.1
stress Nickel (II) chloride 0.8 mM -0.1 -0.2 -4.4 +0.0 +0.1
stress Bacitracin 0.008 mg/ml -0.0 -0.3 -4.0 +0.1 -0.2
carbon source D-Lactate (C) -0.4 -0.3 -3.2 -0.4 -0.3
stress Chlorite 0.1 mM +0.0 +0.1 -4.1 -0.2 -0.0
motility inner cut, R2A soft agar motility assay +0.1 -0.2 -3.5 -0.4 -0.2
lb LB +0.4 -0.0 -4.2 -0.1 -0.0
stress Sisomicin 0.001 mg/ml +0.1 -0.3 -4.1 +0.1 +0.2
nitrogen source Uridine (N) -0.4 -0.7 -2.8 +0.2 +0.1
stress D-Cycloserine 0.05 mg/ml -0.3 +0.1 +7.5 -0.4 +0.9
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