Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_2955 and Ac3H11_2956 are separated by 76 nucleotidesAc3H11_2956 and Ac3H11_2957 are separated by 101 nucleotidesAc3H11_2957 and Ac3H11_2958 are separated by 96 nucleotidesAc3H11_2958 and Ac3H11_2959 are separated by 217 nucleotides Ac3H11_2955 - Cytosine/purine/uracil/thiamine/allantoin permease family protein, at 1,274,081 to 1,275,538 _2955 Ac3H11_2956 - Dihydropyrimidinase (EC 3.5.2.2) (from data), at 1,275,615 to 1,277,069 _2956 Ac3H11_2957 - N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87), at 1,277,171 to 1,278,466 _2957 Ac3H11_2958 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 1,278,563 to 1,280,086 _2958 Ac3H11_2959 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 1,280,304 to 1,282,370 _2959
Group Condition Ac3H11_2955 Ac3H11_2956 Ac3H11_2957 Ac3H11_2958 Ac3H11_2959
nitrogen source Uridine (N) -3.4 -5.5 -3.7 -0.4 -0.7
carbon source D-Glucose (C) -0.6 -0.5 -0.4 -0.2 -0.4
carbon source D-Gluconic Acid (C) -0.5 -0.7 -0.7 +0.3 -0.5
carbon source D-Gluconic Acid (C) -0.9 -0.9 +0.1 +0.0 -0.4
carbon source D-Lactate (C) -0.2 -0.3 -0.6 -0.3 -0.6
temperature LB 30C -0.2 -0.3 -0.4 -0.4 -0.6
carbon source D-Glucose (C) -0.5 -0.5 -0.2 -0.2 -0.5
carbon source succinate (C) -0.4 -0.2 -0.4 -0.3 -0.5
carbon source Tween 20 (C) -0.6 -0.2 -0.3 -0.5 -0.3
carbon source D,L-Lactate (C) -0.4 -0.3 -0.2 -0.4 -0.5
carbon source L-Arabinose (C) -0.5 -0.5 -0.3 -0.1 -0.4
nitrogen source L-Leucine (N) -0.3 +0.0 -0.0 -0.4 -1.0
carbon source L-Arabinose (C) -0.5 -0.1 -0.3 -0.5 -0.4
carbon source D-Fructose (C) -0.4 -0.4 -0.2 -0.1 -0.5
carbon source L-Glutamine (C) -0.4 -0.2 -0.5 -0.2 -0.3
carbon source L-Arabinose (C) -0.4 -0.3 -0.4 -0.1 -0.3
carbon source D,L-Lactate (C) -0.1 -0.3 -0.3 -0.3 -0.6
carbon source a-Ketoglutaric (C) -0.2 -0.1 -0.6 -0.1 -0.7
carbon source D-Ribose (C) -0.3 -0.5 -0.4 -0.0 -0.4
temperature LB 23C -0.3 -0.3 -0.1 -0.4 -0.4
temperature LB 23C -0.4 -0.2 +0.0 -0.4 -0.6
temperature LB 30C -0.1 -0.2 -0.5 -0.3 -0.4
stress perchlorate 10 mM -0.3 -0.1 -0.5 -0.4 -0.2
pH LB, pH10 +0.2 -0.2 -0.5 -0.4 -0.3
phage phage 93.1 -0.3 -0.2 +0.3 -0.3 -0.6
pH LB, pH10 -0.2 -0.2 +0.4 -0.4 -0.6
motility inner cut, R2A soft agar motility assay -0.5 +0.1 +0.5 -0.2 -0.5
motility inner cut, R2A soft agar motility assay -0.6 +0.4 -0.3 +0.1 -0.2
stress Nickel (II) chloride 0.6 mM -0.1 +0.3 +0.0 +0.3 -1.0
stress Sisomicin 0.001 mg/ml -0.4 +0.4 +0.5 +0.1 -0.3
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