Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_2936 and Ac3H11_2937 are separated by 28 nucleotidesAc3H11_2937 and Ac3H11_2938 are separated by 160 nucleotidesAc3H11_2938 and Ac3H11_2939 are separated by 29 nucleotidesAc3H11_2939 and Ac3H11_2940 are separated by 19 nucleotides Ac3H11_2936 - Fructokinase (EC 2.7.1.4), at 1,254,425 to 1,255,438 _2936 Ac3H11_2937 - Xylulose kinase (EC 2.7.1.17), at 1,255,467 to 1,257,014 _2937 Ac3H11_2938 - Transcriptional regulator of various polyols utilization, AraC family, at 1,257,175 to 1,258,107 _2938 Ac3H11_2939 - D-arabinitol 4-dehydrogenase (EC 1.1.1.11), at 1,258,137 to 1,259,528 _2939 Ac3H11_2940 - D-sorbitol 2-dehydrogenase (EC 1.1.1.14) (from data), at 1,259,548 to 1,260,282 _2940
Group Condition Ac3H11_2936 Ac3H11_2937 Ac3H11_2938 Ac3H11_2939 Ac3H11_2940
carbon source D-Sorbitol (C) +0.7 +0.6 -6.4 -0.3 -4.4
lb LB -0.0 -0.8 -0.5 -0.3 -0.4
stress Paraquat dichloride 0.01 mg/ml +0.1 -0.8 -1.4 +0.0 +0.1
pH LB, pH10 +0.1 -0.4 -0.9 -0.6 -0.2
stress Polymyxin B sulfate 0.0001 mg/ml -0.5 -0.2 -0.5 +0.1 -0.6
pH LB, pH5 -0.5 -0.5 -0.5 +0.1 -0.1
stress Zinc 1 mM +0.1 -0.6 +0.1 -0.0 -0.7
carbon source a-Ketoglutaric (C) -0.1 +0.4 -2.9 -0.1 +1.7
stress D-Cycloserine 0.05 mg/ml +0.2 +0.3 -0.9 -0.1 -0.3
phage phage 93.2 +0.2 +0.2 -0.7 -0.2 +0.2
stress Cephalothin 0.005 mg/ml +0.1 +0.3 -0.4 +0.2 -0.5
carbon source D,L-Lactate (C) -0.2 +0.3 -0.5 +0.1 +0.2
stress Nickel (II) chloride 0.6 mM -0.4 -0.4 +0.5 +0.1 +0.1
motility inner cut, R2A soft agar motility assay +0.1 +0.1 -0.6 -0.1 +0.5
carbon source pyruvate (C) -0.3 +0.3 -0.5 +0.0 +0.6
stress nitrite 10 mM -0.3 +0.5 -0.3 +0.3 -0.1
carbon source succinate (C) -0.3 +0.4 -0.6 +0.2 +0.4
carbon source D-Glucose (C) -0.5 +0.0 +0.1 +0.5 +0.3
nitrogen source L-Isoleucine (N) -0.5 +0.4 +0.4 +0.0 +0.1
lb LB -0.1 +0.2 +0.9 +0.1 -0.4
stress Cisplatin 0.005 mg/ml +0.5 -0.4 +0.7 +0.2 -0.1
nitrogen source Ammonium chloride (N) +0.1 -0.1 +0.9 +0.3 -0.3
nitrogen source L-Alanine (N) -0.3 -0.3 +1.2 -0.0 +0.4
carbon source succinate (C) -0.1 +0.2 +0.4 +0.2 +0.4
stress Chlorite 0.1 mM +0.1 -0.9 +1.4 +0.1 +0.6
carbon source D-Gluconic Acid (C) -0.3 +0.3 +0.4 +0.2 +0.9
carbon source D-Gluconic Acid (C) -0.0 +0.3 +0.3 -0.1 +1.1
carbon source D-Ribose (C) -0.2 +0.2 -0.2 +1.9 -0.0
carbon source D-Ribose (C) -0.3 +0.3 +0.3 +1.6 -0.1
carbon source a-Ketoglutaric (C) +0.1 +0.7 -0.4 +0.3 +1.6
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