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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_2925 and Ac3H11_2926 are separated by 140 nucleotides
Ac3H11_2926 and Ac3H11_2927 are separated by 63 nucleotides
Ac3H11_2927 and Ac3H11_2928 are separated by 125 nucleotides
Ac3H11_2928 and Ac3H11_2929 are separated by 2 nucleotides
Ac3H11_2925 - Chorismate synthase (EC 4.2.3.5), at 1,242,201 to 1,243,298
_2925
Ac3H11_2926 - FIG01024387: hypothetical protein, at 1,243,439 to 1,245,010
_2926
Ac3H11_2927 - Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205), at 1,245,074 to 1,245,541
_2927
Ac3H11_2928 - O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48), at 1,245,667 to 1,246,977
_2928
Ac3H11_2929 - Probable hydrolase protein (EC 3.-.-.-), at 1,246,980 to 1,247,798
_2929
Group
Condition
Ac3H11
_2925
Ac3H11
_2926
Ac3H11
_2927
Ac3H11
_2928
Ac3H11
_2929
nitrogen source
Uridine (N)
-4.7
-0.1
-3.1
+0.5
-0.1
nitrogen source
L-Leucine (N)
-4.8
-0.1
-1.8
-0.1
-0.5
nitrogen source
L-Histidine (N)
-5.2
-0.1
-1.5
-0.2
+0.3
carbon source
D,L-Lactate (C)
-5.6
+0.0
-0.4
+0.1
-0.3
carbon source
pyruvate (C)
-5.7
-0.0
-0.3
+0.1
-0.1
nitrogen source
L-Glutamine (N)
-4.6
-0.1
-1.2
+0.1
-0.1
carbon source
D-Galactose (C)
-5.0
-0.0
-0.8
+0.1
-0.0
carbon source
L-Arabinose (C)
-5.3
+0.1
-0.5
+0.1
-0.1
nitrogen source
L-Threonine (N)
-4.7
+0.1
-1.8
+0.6
+0.4
carbon source
Tween 20 (C)
-4.4
+0.1
-1.1
-0.2
+0.1
carbon source
propionate (C)
-5.0
+0.1
-0.9
+0.1
+0.2
carbon source
D-Lactate (C)
-5.1
-0.0
-0.3
-0.0
+0.1
carbon source
D-Galactose (C)
-5.0
+0.0
-0.7
+0.1
+0.2
carbon source
L-Lactate (C)
-5.1
+0.1
-0.2
+0.0
-0.1
nitrogen source
Ammonium chloride (N)
-3.7
-0.2
-1.8
-0.3
+0.7
carbon source
L-Lactate (C)
-5.0
+0.1
-0.0
-0.3
+0.1
nitrogen source
L-Isoleucine (N)
-3.8
-0.2
-0.8
-0.0
-0.4
carbon source
D-Glucose (C)
-5.1
+0.0
-0.3
+0.2
+0.1
carbon source
D-Galactose (C)
-4.4
+0.3
-1.1
+0.2
-0.1
nitrogen source
L-Proline (N)
-4.6
-0.1
-0.6
+0.2
-0.0
nitrogen source
D-Alanine (N)
-4.6
-0.2
-0.6
+0.1
+0.1
carbon source
D-Fructose (C)
-4.9
-0.0
-0.5
+0.3
+0.1
carbon source
L-Arabinose (C)
-4.8
+0.0
-0.5
-0.1
+0.3
carbon source
D-Fructose (C)
-4.9
+0.0
+0.1
+0.1
-0.4
carbon source
D-Ribose (C)
-4.8
+0.1
-0.3
-0.1
+0.2
carbon source
succinate (C)
-5.3
+0.1
-0.0
+0.1
+0.4
nitrogen source
L-Alanine (N)
-4.6
-0.1
-0.5
+0.3
+0.4
carbon source
D-Gluconic Acid (C)
-5.4
-0.0
+0.6
-0.0
+0.5
carbon source
succinate (C)
-3.9
+0.1
+0.1
+0.3
-0.8
carbon source
D-Gluconic Acid (C)
-5.0
-0.0
+0.9
+0.2
+0.1
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