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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_2918 and Ac3H11_2919 are separated by 7 nucleotides
Ac3H11_2919 and Ac3H11_2920 are separated by 753 nucleotides
Ac3H11_2920 and Ac3H11_2921 are separated by 254 nucleotides
Ac3H11_2921 and Ac3H11_2922 are separated by 72 nucleotides
Ac3H11_2918 - Plectin 1, at 1,232,453 to 1,235,215
_2918
Ac3H11_2919 - hypothetical protein, at 1,235,223 to 1,235,588
_2919
Ac3H11_2920 - FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 1,236,342 to 1,237,181
_2920
Ac3H11_2921 - Serine hydroxymethyltransferase (EC 2.1.2.1), at 1,237,436 to 1,238,680
_2921
Ac3H11_2922 - Ribonucleotide reductase transcriptional regulator NrdR, at 1,238,753 to 1,239,151
_2922
Group
Condition
Ac3H11
_2918
Ac3H11
_2919
Ac3H11
_2920
Ac3H11
_2921
Ac3H11
_2922
stress
Phosphomycin 0.02 mg/ml
-0.8
-0.1
-1.5
N.D.
N.D.
stress
Sisomicin 0.0005 mg/ml
-0.0
+0.0
-2.3
N.D.
N.D.
stress
Cisplatin 0.0025 mg/ml
-0.2
-0.1
-1.9
N.D.
N.D.
nitrogen source
L-Histidine (N)
-0.5
-0.3
-1.3
N.D.
N.D.
stress
Cobalt chloride 0.16 mM
-0.5
-0.1
-1.5
N.D.
N.D.
stress
Sisomicin 0.001 mg/ml
-0.6
-0.1
-1.3
N.D.
N.D.
stress
copper (II) chloride 1 mM
-0.5
-0.0
-1.5
N.D.
N.D.
nitrogen source
L-Threonine (N)
-0.3
-0.3
-1.4
N.D.
N.D.
lb
LB
-0.9
-0.1
-0.9
N.D.
N.D.
stress
Phosphomycin 0.06 mg/ml
-0.6
+0.1
-1.4
N.D.
N.D.
nitrogen source
Ammonium chloride (N)
-0.6
-0.1
-1.1
N.D.
N.D.
stress
perchlorate 10 mM
-0.5
-0.1
-1.1
N.D.
N.D.
nitrogen source
L-Alanine (N)
-0.5
-0.3
-0.8
N.D.
N.D.
stress
Zinc 1 mM
-0.1
-0.1
-1.4
N.D.
N.D.
stress
Nickel (II) chloride 0.6 mM
+0.0
-0.0
-1.6
N.D.
N.D.
stress
Paraquat dichloride 0.01 mg/ml
+0.2
-0.0
-1.6
N.D.
N.D.
stress
Cobalt chloride 0.32 mM
-0.3
+0.0
-1.2
N.D.
N.D.
stress
Nickel (II) chloride 0.6 mM
+0.3
-0.1
-1.3
N.D.
N.D.
carbon source
pyruvate (C)
-0.5
-0.3
+0.8
N.D.
N.D.
carbon source
propionate (C)
+1.1
+0.1
-0.5
N.D.
N.D.
carbon source
pyruvate (C)
-0.6
-0.0
+1.3
N.D.
N.D.
pH
LB, pH10
-0.1
-0.3
+1.1
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
-0.5
-0.2
+1.6
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
-0.6
-0.1
+2.0
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
-0.2
+0.1
+1.6
N.D.
N.D.
carbon source
succinate (C)
-0.1
-0.0
+1.6
N.D.
N.D.
carbon source
succinate (C)
-0.1
-0.1
+1.7
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
+0.4
-0.1
+1.7
N.D.
N.D.
nitrogen source
L-tyrosine (N)
+1.3
+0.0
+0.9
N.D.
N.D.
carbon source
L-Malic (C)
-0.5
-0.3
+3.1
N.D.
N.D.
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