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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_2893 and Ac3H11_2894 are separated by 132 nucleotides
Ac3H11_2894 and Ac3H11_2895 are separated by 380 nucleotides
Ac3H11_2895 and Ac3H11_2896 are separated by 556 nucleotides
Ac3H11_2896 and Ac3H11_2897 are separated by 45 nucleotides
Ac3H11_2893 - Metallo-beta-lactamase superfamily protein PA0057, at 1,203,090 to 1,203,956
_2893
Ac3H11_2894 - LysR-family transcriptional regulator clustered with PA0057, at 1,204,089 to 1,204,982
_2894
Ac3H11_2895 - Mobile element protein, at 1,205,363 to 1,206,514
_2895
Ac3H11_2896 - Putative extracytoplasmic tricarboxylate-binding receptor of a tripartite transporter, in cluster with DUF1446, at 1,207,071 to 1,208,063
_2896
Ac3H11_2897 - Small uncharacterized protein Bpro_4170, at 1,208,109 to 1,208,480
_2897
Group
Condition
Ac3H11
_2893
Ac3H11
_2894
Ac3H11
_2895
Ac3H11
_2896
Ac3H11
_2897
stress
Chlorite 0.1 mM
+0.0
-0.2
+0.1
-0.5
-1.6
carbon source
pyruvate (C)
-0.1
+0.0
-0.2
-0.2
-1.5
stress
perchlorate 10 mM
+0.1
-0.3
-0.1
+0.0
-1.5
stress
Nickel (II) chloride 0.6 mM
-0.2
-0.1
-0.1
-0.4
-1.0
stress
Bacitracin 0.008 mg/ml
+0.1
-0.1
-0.1
-0.1
-1.7
stress
Paraquat dichloride 0.01 mg/ml
+0.2
-0.5
+0.0
+0.1
-1.7
lb
LB
-0.4
-0.3
-0.2
-0.1
-0.7
stress
Chlorate 20 mM
-0.4
-0.6
-0.2
-0.2
-0.3
carbon source
D-Ribose (C)
+0.1
-0.0
-0.3
+0.2
-1.4
lb
LB
+0.2
-0.3
-0.3
-0.1
-0.7
phage
phage 93.1
+0.1
+0.2
-0.5
-0.3
-0.4
lb
LB
+0.1
+0.1
-0.1
+0.1
-0.9
stress
Cobalt chloride 0.4 mM
-0.2
+0.5
-0.0
-0.0
-0.9
carbon source
D-Sorbitol (C)
+0.3
-0.1
-0.2
+0.1
-0.7
carbon source
pyruvate (C)
-0.3
+0.1
-0.4
+0.4
-0.5
pH
LB, pH10
-0.4
-0.3
+0.1
+0.3
-0.3
stress
nitrite 10 mM
-0.4
-0.1
+0.0
+0.6
-0.3
motility
inner cut, R2A soft agar motility assay
+0.3
-0.4
+0.3
-0.1
-0.3
motility
inner cut, R2A soft agar motility assay
+0.3
+0.2
-0.2
+0.4
-0.9
nitrogen source
L-Alanine (N)
-0.8
-0.8
-0.3
+0.3
+1.4
pH
LB, pH10
+0.2
+0.4
-0.3
+0.6
-1.0
lb
LB
-0.0
-0.0
-0.2
-0.3
+0.9
stress
D-Cycloserine 0.05 mg/ml
-0.1
-0.1
+0.1
-0.3
+0.8
nitrogen source
Ammonium chloride (N)
+0.4
+0.6
-0.0
-0.3
-0.0
pH
LB, pH9
-0.1
+0.0
-0.2
-0.0
+1.1
lb
LB
+0.3
-0.4
+0.1
-0.2
+0.9
stress
Cisplatin 0.0025 mg/ml
+0.2
+0.4
-0.1
+0.8
-0.4
stress
Cisplatin 0.005 mg/ml
+0.1
+0.0
-0.4
+0.8
+0.5
stress
Nickel (II) chloride 0.8 mM
+0.4
+0.2
-0.1
-0.0
+0.9
stress
nitrite 10 mM
+0.2
-0.0
-0.0
-0.1
+1.7
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