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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_2874 and Ac3H11_2875 overlap by 4 nucleotides
Ac3H11_2875 and Ac3H11_2876 are separated by 295 nucleotides
Ac3H11_2876 and Ac3H11_2877 are separated by 22 nucleotides
Ac3H11_2877 and Ac3H11_2878 are separated by 169 nucleotides
Ac3H11_2874 - hypothetical protein, at 1,183,869 to 1,184,009
_2874
Ac3H11_2875 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 1,184,006 to 1,185,454
_2875
Ac3H11_2876 - hypothetical protein, at 1,185,750 to 1,186,106
_2876
Ac3H11_2877 - Nucleoside-diphosphate-sugar epimerases, at 1,186,129 to 1,187,295
_2877
Ac3H11_2878 - Inosose isomerase (EC 5.3.99.-), at 1,187,465 to 1,188,478
_2878
Group
Condition
Ac3H11
_2874
Ac3H11
_2875
Ac3H11
_2876
Ac3H11
_2877
Ac3H11
_2878
stress
Cisplatin 0.005 mg/ml
-1.6
+0.3
-3.6
+0.1
+0.2
pH
LB, pH10
-1.8
-0.5
-1.2
+0.0
-0.3
carbon source
a-Ketoglutaric (C)
-1.6
+0.2
-0.4
+0.0
-0.7
nitrogen source
D-Alanine (N)
-2.2
+0.1
-0.0
+0.0
-0.1
pH
LB, pH10
-1.1
-0.3
-0.6
+0.3
-0.2
stress
nitrate 100 mM
-0.3
+0.1
-1.2
-0.1
-0.1
carbon source
L-Lactate (C)
-0.1
+0.0
-0.8
-0.3
-0.4
carbon source
D-Lactate (C)
-0.3
-0.5
-0.4
+0.2
-0.3
carbon source
D-Lactate (C)
-0.4
-0.2
+0.2
-0.3
-0.5
stress
A22 0.025 mg/ml
+0.3
-0.2
-1.0
-0.1
-0.1
carbon source
D-Gluconic Acid (C)
-0.3
+0.3
-0.7
-0.1
-0.4
stress
copper (II) chloride 2 mM
-1.2
-0.3
-0.3
+0.2
+0.5
stress
Ceftazidime 0.01 mg/ml
+0.1
-0.3
-0.8
-0.1
+0.1
stress
nitrite 10 mM
-0.0
+0.1
-1.1
-0.2
+0.3
nitrogen source
L-Leucine (N)
+0.2
+0.5
-1.1
-0.0
-0.3
lb
LB
+0.2
+0.4
-1.6
-0.0
+0.4
stress
Chlorite 0.1 mM
-0.2
-0.4
-0.3
-0.1
+0.4
stress
Bacitracin 0.032 mg/ml
+0.2
-0.0
-0.7
+0.3
-0.4
stress
syringaldehyde 2.5 mM
+0.6
-0.1
-0.6
-0.2
-0.1
stress
D-Cycloserine 0.05 mg/ml
+0.5
-0.3
-1.0
+0.7
-0.1
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.1
+0.1
+0.6
-0.5
-0.2
stress
Paraquat dichloride 0.01 mg/ml
-0.9
+0.1
+0.7
-0.4
+0.4
nitrogen source
Ammonium chloride (N)
+0.4
-0.4
-0.8
+0.7
+0.2
stress
Cobalt chloride 0.16 mM
-0.4
+0.1
+0.9
-0.1
-0.2
stress
Cisplatin 0.0025 mg/ml
+0.0
+0.5
-0.7
-0.0
+0.9
lb
LB
+0.6
-0.2
+0.8
-0.1
-0.1
carbon source
D-Fructose (C)
+0.3
+0.1
+0.7
+0.2
-0.2
phage
phage 93.2
-0.4
-0.4
-0.2
+4.1
+0.1
phage
phage 93.1
-0.3
+0.0
-0.2
+4.2
-0.1
phage
phage 93.1
-0.3
-0.2
+0.2
+4.5
+0.4
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