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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_2837 and Ac3H11_2838 are separated by 127 nucleotides
Ac3H11_2838 and Ac3H11_2839 are separated by 218 nucleotides
Ac3H11_2839 and Ac3H11_2840 are separated by 98 nucleotides
Ac3H11_2840 and Ac3H11_2841 are separated by 41 nucleotides
Ac3H11_2837 - Iron-uptake factor PiuC, at 1,144,729 to 1,145,415
_2837
Ac3H11_2838 - L-lactate dehydrogenase (EC 1.1.2.3), at 1,145,543 to 1,146,688
_2838
Ac3H11_2839 - FOG: HEAT repeat, at 1,146,907 to 1,147,116
_2839
Ac3H11_2840 - Ferric siderophore transport system, periplasmic binding protein TonB, at 1,147,215 to 1,147,901
_2840
Ac3H11_2841 - MotA/TolQ/ExbB proton channel family protein, at 1,147,943 to 1,148,662
_2841
Group
Condition
Ac3H11
_2837
Ac3H11
_2838
Ac3H11
_2839
Ac3H11
_2840
Ac3H11
_2841
stress
Cobalt chloride 0.32 mM
-1.9
-1.6
N.D.
N.D.
N.D.
stress
Cobalt chloride 0.32 mM
-1.3
-1.1
N.D.
N.D.
N.D.
stress
Cobalt chloride 0.4 mM
-0.8
-0.9
N.D.
N.D.
N.D.
stress
Tetracycline 0.0001 mg/ml
-0.9
-0.7
N.D.
N.D.
N.D.
stress
Cobalt chloride 0.32 mM
-0.7
-0.7
N.D.
N.D.
N.D.
motility
inner cut, R2A soft agar motility assay
-0.7
-0.7
N.D.
N.D.
N.D.
stress
Bacitracin 0.032 mg/ml
-0.7
-0.6
N.D.
N.D.
N.D.
stress
Nickel (II) chloride 0.8 mM
-0.6
-0.2
N.D.
N.D.
N.D.
motility
inner cut, R2A soft agar motility assay
-0.4
-0.4
N.D.
N.D.
N.D.
stress
Thallium(I) acetate 0.0006 mg/ml
-0.3
-0.5
N.D.
N.D.
N.D.
nitrogen source
L-tyrosine (N)
-0.2
-0.5
N.D.
N.D.
N.D.
motility
inner cut, R2A soft agar motility assay
+0.0
-0.7
N.D.
N.D.
N.D.
stress
D-Cycloserine 0.05 mg/ml
+0.6
-0.4
N.D.
N.D.
N.D.
stress
Phosphomycin 0.02 mg/ml
+0.2
+0.6
N.D.
N.D.
N.D.
stress
A22 0.025 mg/ml
+0.4
+0.5
N.D.
N.D.
N.D.
nitrogen source
Ammonium chloride (N)
+0.5
+0.5
N.D.
N.D.
N.D.
stress
Cisplatin 0.005 mg/ml
+0.8
+0.3
N.D.
N.D.
N.D.
stress
copper (II) chloride 1 mM
+0.6
+0.6
N.D.
N.D.
N.D.
stress
Sisomicin 0.001 mg/ml
+0.5
+0.7
N.D.
N.D.
N.D.
lb
LB
+0.6
+0.6
N.D.
N.D.
N.D.
lb
LB
+0.6
+0.6
N.D.
N.D.
N.D.
stress
Paraquat dichloride 0.01 mg/ml
+0.4
+0.8
N.D.
N.D.
N.D.
stress
Nickel (II) chloride 0.6 mM
+0.4
+0.9
N.D.
N.D.
N.D.
lb
LB
+0.5
+0.9
N.D.
N.D.
N.D.
stress
Phosphomycin 0.06 mg/ml
+0.7
+0.7
N.D.
N.D.
N.D.
lb
LB
+0.7
+0.9
N.D.
N.D.
N.D.
stress
Chlorite 0.1 mM
+0.9
+0.8
N.D.
N.D.
N.D.
stress
Polymyxin B sulfate 0.0001 mg/ml
+1.0
+0.9
N.D.
N.D.
N.D.
stress
Cisplatin 0.0025 mg/ml
+1.2
+0.9
N.D.
N.D.
N.D.
stress
copper (II) chloride 1 mM
+1.3
+1.3
N.D.
N.D.
N.D.
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