Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_2817 and Ac3H11_2818 are separated by 64 nucleotidesAc3H11_2818 and Ac3H11_2819 are separated by 9 nucleotidesAc3H11_2819 and Ac3H11_2820 are separated by 21 nucleotidesAc3H11_2820 and Ac3H11_2821 are separated by 4 nucleotides Ac3H11_2817 - hypothetical protein, at 1,121,081 to 1,121,377 _2817 Ac3H11_2818 - IncF plasmid conjugative transfer pilus assembly protein TraF, at 1,121,442 to 1,122,263 _2818 Ac3H11_2819 - IncF plasmid conjugative transfer pilus assembly protein TraH, at 1,122,273 to 1,123,721 _2819 Ac3H11_2820 - IncF plasmid conjugative transfer protein TraG, at 1,123,743 to 1,126,517 _2820 Ac3H11_2821 - hypothetical protein, at 1,126,522 to 1,126,854 _2821
Group Condition Ac3H11_2817 Ac3H11_2818 Ac3H11_2819 Ac3H11_2820 Ac3H11_2821
phage phage 93.2 -0.2 -0.9 -0.1 -0.1 -0.6
lb LB +0.2 -0.8 -0.1 +0.0 -0.9
lb LB -0.8 -0.4 +0.0 +0.2 -0.5
phage phage 93.1 -0.5 -0.2 +0.0 +0.1 -0.5
stress Cisplatin 0.005 mg/ml -0.6 -0.5 -0.1 -0.3 +0.5
nitrogen source L-Threonine (N) -0.3 -0.6 +0.2 +0.1 -0.4
stress nitrate 100 mM -0.1 +0.6 -0.3 -0.1 -0.9
nitrogen source Ammonium chloride (N) +1.2 +0.1 +0.1 -0.1 -2.1
nitrogen source D-Alanine (N) +0.4 +0.1 +0.1 -0.0 -1.3
motility inner cut, R2A soft agar motility assay -0.1 -1.1 +0.1 -0.1 +0.6
lb LB -0.6 -0.2 -0.1 -0.1 +0.3
stress Nickel (II) chloride 0.8 mM +0.4 -0.7 -0.1 +0.2 -0.4
stress Cisplatin 0.0025 mg/ml +0.3 +0.2 -0.0 +0.0 -0.9
stress Chlorite 0.1 mM -0.9 +0.1 -0.0 +0.0 +0.5
stress Cobalt chloride 0.32 mM +0.4 +0.1 -0.3 +0.0 -0.5
stress Nickel (II) chloride 0.6 mM +0.8 -0.4 -0.2 -0.2 -0.1
carbon source a-Ketoglutaric (C) -0.5 +0.2 -0.2 +0.3 +0.1
stress nitrite 10 mM +0.7 -0.7 +0.1 -0.1 +0.1
lb LB +0.4 +0.4 -0.2 -0.1 -0.4
carbon source D-Galactose (C) -0.2 +0.5 +0.1 +0.1 -0.4
carbon source D-Galactose (C) -0.2 +0.5 -0.4 +0.0 +0.2
stress D-Cycloserine 0.05 mg/ml -0.6 +0.7 +0.1 +0.2 +0.0
motility inner cut, R2A soft agar motility assay +0.2 +1.4 -0.2 +0.3 -0.9
carbon source succinate (C) -0.3 +0.6 +0.1 +0.1 +0.5
carbon source D-Lactate (C) +0.2 +0.6 -0.4 -0.0 +0.6
pH LB, pH10 +0.2 +0.4 +0.3 -0.3 +0.5
nitrogen source L-Alanine (N) +0.6 +0.4 +0.3 -0.2 +0.1
stress Sisomicin 0.004 mg/ml +0.0 +0.5 +0.0 -0.1 +0.7
carbon source a-Ketoglutaric (C) -0.3 +1.5 -0.5 +0.1 +0.6
stress copper (II) chloride 2 mM -0.2 +0.9 -0.3 +0.2 +1.2
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