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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_276 and Ac3H11_277 are separated by 30 nucleotides
Ac3H11_277 and Ac3H11_278 are separated by 54 nucleotides
Ac3H11_278 and Ac3H11_279 are separated by 100 nucleotides
Ac3H11_279 and Ac3H11_280 are separated by 123 nucleotides
Ac3H11_276 - Putative SAM-dependent methyltransferase Bucepa02006346, at 100,971 to 101,525
_276
Ac3H11_277 - 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7), at 101,556 to 102,455
_277
Ac3H11_278 - FIG002207: Probable transmembrane protein, at 102,510 to 103,604
_278
Ac3H11_279 - Metal-dependent hydrolases of the beta-lactamase superfamily I, at 103,705 to 104,502
_279
Ac3H11_280 - hypothetical protein, at 104,626 to 104,910
_280
Group
Condition
Ac3H11
_276
Ac3H11
_277
Ac3H11
_278
Ac3H11
_279
Ac3H11
_280
carbon source
D-Mannose (C)
-0.3
-2.1
N.D.
+0.0
N.D.
carbon source
Tween 20 (C)
-0.1
-2.3
N.D.
+0.1
N.D.
carbon source
D-Glucose (C)
+0.1
-2.3
N.D.
-0.1
N.D.
carbon source
L-Arabinose (C)
-0.0
-1.9
N.D.
+0.1
N.D.
carbon source
D-Glucose (C)
+0.0
-1.9
N.D.
+0.0
N.D.
carbon source
D-Fructose (C)
-0.1
-1.6
N.D.
-0.0
N.D.
carbon source
L-Asparagine (C)
-0.1
-1.5
N.D.
-0.1
N.D.
carbon source
D-Sorbitol (C)
-0.1
-1.5
N.D.
-0.0
N.D.
nitrogen source
Ammonium chloride (N)
+0.9
-3.6
N.D.
+1.1
N.D.
nitrogen source
L-Histidine (N)
+0.2
-1.9
N.D.
+0.1
N.D.
nitrogen source
L-Isoleucine (N)
+0.2
-1.4
N.D.
-0.3
N.D.
carbon source
D-Galactose (C)
+0.2
-1.7
N.D.
+0.0
N.D.
carbon source
L-Glutamine (C)
-0.3
-1.0
N.D.
-0.1
N.D.
phage
phage 93.1
+0.1
-1.4
N.D.
-0.0
N.D.
carbon source
L-Arabinose (C)
+0.1
-1.5
N.D.
+0.0
N.D.
nitrogen source
L-Glutamine (N)
+0.0
-1.2
N.D.
-0.1
N.D.
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.3
-2.3
N.D.
+0.7
N.D.
carbon source
D-Galactose (C)
+0.2
-1.2
N.D.
-0.1
N.D.
carbon source
D-Fructose (C)
+0.3
-1.1
N.D.
-0.2
N.D.
stress
Cobalt chloride 0.16 mM
+0.2
-1.6
N.D.
+0.6
N.D.
stress
Aluminum chloride 2 mM
-0.2
-0.9
N.D.
+0.4
N.D.
stress
Cobalt chloride 0.32 mM
+0.2
-1.3
N.D.
+0.7
N.D.
motility
inner cut, R2A soft agar motility assay
+0.1
-0.8
N.D.
+0.5
N.D.
carbon source
D-Fructose (C)
+0.5
-0.8
N.D.
+0.1
N.D.
stress
A22 0.025 mg/ml
+0.2
-0.7
N.D.
+0.5
N.D.
pH
LB, pH10
+0.5
-0.8
N.D.
+0.8
N.D.
lb
LB
+0.2
-0.5
N.D.
+0.8
N.D.
lb
LB
+0.3
-0.5
N.D.
+0.8
N.D.
stress
copper (II) chloride 2 mM
-0.0
+1.1
N.D.
-0.3
N.D.
stress
D-Cycloserine 0.05 mg/ml
-0.2
+6.7
N.D.
-0.5
N.D.
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