Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_2754 and Ac3H11_2755 are separated by 37 nucleotidesAc3H11_2755 and Ac3H11_2756 are separated by 159 nucleotidesAc3H11_2756 and Ac3H11_2757 overlap by 4 nucleotidesAc3H11_2757 and Ac3H11_2758 are separated by 98 nucleotides Ac3H11_2754 - Biphenyl dioxygenase beta subunit (EC 1.14.12.18), at 1,054,693 to 1,055,262 _2754 Ac3H11_2755 - Large subunit naph/bph dioxygenase, at 1,055,300 to 1,056,700 _2755 Ac3H11_2756 - Permease of the drug/metabolite transporter (DMT) superfamily, at 1,056,860 to 1,057,753 _2756 Ac3H11_2757 - 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45), at 1,057,750 to 1,058,769 _2757 Ac3H11_2758 - hypothetical protein, at 1,058,868 to 1,059,182 _2758
Group Condition Ac3H11_2754 Ac3H11_2755 Ac3H11_2756 Ac3H11_2757 Ac3H11_2758
nitrogen source L-Alanine (N) +0.4 +0.1 -1.1 +0.0 -0.6
stress Cisplatin 0.005 mg/ml -0.6 -0.2 +0.0 -0.1 -0.2
stress D-Cycloserine 0.05 mg/ml -0.4 -0.4 +0.2 -0.2 -0.1
stress Bacitracin 0.032 mg/ml -0.2 -0.2 -0.1 -0.2 -0.1
stress nitrate 45 mM -0.2 -0.2 -0.3 -0.1 -0.1
carbon source succinate (C) -0.2 -0.3 -0.2 -0.1 +0.0
carbon source D-Lactate (C) -0.2 -0.2 -0.5 -0.0 +0.1
phage phage 93.2 +0.1 -0.1 -0.3 -0.0 -0.4
carbon source pyruvate (C) +0.1 -0.1 -0.2 -0.3 -0.3
stress perchlorate 10 mM -0.3 -0.1 -0.3 +0.3 -0.1
stress Phosphomycin 0.06 mg/ml -0.5 -0.3 +0.2 +0.2 -0.2
stress Nickel (II) chloride 0.6 mM -0.2 +0.1 -0.5 +0.2 -0.1
lb LB -0.3 -0.1 -0.3 +0.3 -0.0
carbon source D-Lactate (C) +0.2 +0.1 -0.5 +0.1 -0.1
carbon source a-Ketoglutaric (C) +0.0 -0.3 -0.0 +0.3 -0.3
lb LB -0.1 +0.1 -0.4 +0.0 +0.2
nitrogen source L-Threonine (N) +0.2 -0.1 -0.1 -0.4 +0.2
pH LB, pH9 +0.2 -0.1 -0.2 +0.2 -0.1
stress A22 0.025 mg/ml +0.2 -0.0 -0.2 +0.3 -0.2
stress Nickel (II) chloride 0.6 mM -0.2 -0.1 -0.1 +0.2 +0.3
pH LB, pH10 +0.4 +0.1 +0.0 -0.4 -0.1
motility inner cut, R2A soft agar motility assay +0.4 +0.0 -0.3 +0.1 -0.2
nitrogen source D-Alanine (N) -0.4 +0.2 +0.1 -0.2 +0.4
lb LB -0.4 +0.2 +0.0 +0.2 +0.1
motility inner cut, R2A soft agar motility assay +0.2 -0.3 +0.0 +0.1 +0.3
stress Cobalt chloride 0.4 mM -0.0 +0.3 -0.2 +0.1 +0.3
nitrogen source Ammonium chloride (N) +0.2 +0.4 -0.4 +0.0 +0.2
phage phage 93.1 +0.2 +0.2 +0.3 -0.1 -0.1
motility inner cut, R2A soft agar motility assay +0.2 -0.3 +0.5 +0.1 -0.1
lb LB +0.2 +0.1 -0.1 +0.2 +0.3
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