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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_2698 and Ac3H11_2699 are separated by 105 nucleotides
Ac3H11_2699 and Ac3H11_2700 are separated by 15 nucleotides
Ac3H11_2700 and Ac3H11_2701 are separated by 481 nucleotides
Ac3H11_2701 and Ac3H11_2702 are separated by 78 nucleotides
Ac3H11_2698 - hypothetical protein, at 993,384 to 994,802
_2698
Ac3H11_2699 - Transcriptional regulator, MarR family, at 994,908 to 996,443
_2699
Ac3H11_2700 - FIG00575888: hypothetical protein, at 996,459 to 997,400
_2700
Ac3H11_2701 - FIG002188: hypothetical protein, at 997,882 to 998,817
_2701
Ac3H11_2702 - hypothetical protein, at 998,896 to 999,321
_2702
Group
Condition
Ac3H11
_2698
Ac3H11
_2699
Ac3H11
_2700
Ac3H11
_2701
Ac3H11
_2702
stress
copper (II) chloride 2 mM
+0.2
-0.3
-0.5
-0.3
-0.7
motility
inner cut, R2A soft agar motility assay
-0.2
-0.4
-0.2
-0.6
-0.2
motility
inner cut, R2A soft agar motility assay
-0.2
-0.3
+0.0
-0.2
-0.8
nitrogen source
D-Alanine (N)
+0.2
-0.2
+0.0
+0.4
-1.6
carbon source
propionate (C)
+0.2
-0.1
-0.4
-0.2
-0.6
stress
nitrate 100 mM
+0.1
-0.5
-0.6
+0.0
+0.0
stress
Chlorite 0.1 mM
-0.3
+0.2
-0.2
+0.1
-0.7
carbon source
a-Ketoglutaric (C)
-0.3
-0.4
-0.2
+0.0
+0.3
pH
LB, pH10
+0.0
+0.4
+0.1
+0.2
-0.9
stress
Cisplatin 0.0025 mg/ml
+0.1
+0.0
-0.6
-0.1
+0.6
stress
Sisomicin 0.004 mg/ml
+0.2
+0.2
+0.2
+0.0
-0.6
stress
D-Cycloserine 0.05 mg/ml
-0.1
-0.2
+0.2
-0.2
+0.8
carbon source
a-Ketoglutaric (C)
-0.0
-0.2
-0.3
+0.0
+0.9
pH
LB, pH5
+0.5
+0.2
-0.2
+0.3
-0.3
pH
LB, pH10
-0.4
+0.3
-0.4
+0.2
+0.8
carbon source
casaminos (C)
+0.1
+0.3
-0.2
-0.1
+0.5
stress
Tetracycline 0.0001 mg/ml
+0.2
+0.3
+0.1
+0.3
-0.2
pH
LB, pH6
+0.3
+0.1
-0.2
+0.1
+0.5
stress
Cobalt chloride 0.4 mM
+0.2
-0.3
+0.7
+0.2
+0.0
stress
Cisplatin 0.005 mg/ml
-0.1
-0.1
+0.5
+0.4
+0.2
stress
copper (II) chloride 1 mM
+0.2
+0.2
-0.2
+0.2
+0.5
stress
Cobalt chloride 0.32 mM
+0.6
-0.1
+0.3
+0.4
-0.4
phage
phage 93.2
-0.3
+0.3
+0.1
+0.2
+0.6
stress
Bacitracin 0.008 mg/ml
-0.0
+0.2
-0.1
+0.3
+0.6
nitrogen source
Uridine (N)
+0.0
+0.2
+0.4
+0.1
+0.5
phage
phage 93.1
+0.3
+0.1
-0.2
+0.4
+0.7
stress
sodium fluoride 50 mM
+0.2
+0.4
+0.4
+0.2
+0.1
nitrogen source
L-Arginine (N)
+0.2
+0.4
+0.1
+0.1
+0.5
stress
Nickel (II) chloride 0.6 mM
+0.2
+0.4
+0.1
-0.1
+1.0
nitrogen source
L-Alanine (N)
+0.5
-0.1
+0.4
-0.2
+1.0
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Ac3H11_2700
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