Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_2598 and Ac3H11_2599 are separated by 93 nucleotides
Ac3H11_2599 and Ac3H11_2600 are separated by 4 nucleotides
Ac3H11_2600 and Ac3H11_2601 are separated by 69 nucleotides
Ac3H11_2601 and Ac3H11_2602 are separated by 233 nucleotides
Ac3H11_2598 - DNA recombination protein RmuC, at 879,703 to 881,406
_2598
Ac3H11_2599 - Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-), at 881,500 to 882,489
_2599
Ac3H11_2600 - Probable transmembrane protein, at 882,494 to 883,921
_2600
Ac3H11_2601 - Nicotinate phosphoribosyltransferase (EC 2.4.2.11), at 883,991 to 885,211
_2601
Ac3H11_2602 - putative 4-hydroxybenzoyl-CoA thioesterase, at 885,445 to 885,945
_2602
Group
Condition
Ac3H11
_2598
Ac3H11
_2599
Ac3H11
_2600
Ac3H11
_2601
Ac3H11
_2602
carbon source
pyruvate (C)
-0.7
-0.2
-2.0
-1.1
+0.1
carbon source
pyruvate (C)
-0.6
-0.1
-2.2
-1.0
+0.1
carbon source
pyruvate (C)
-0.6
-0.3
-1.6
-0.7
+0.1
carbon source
D-Lactate (C)
-0.6
+0.1
-1.3
-1.0
-0.1
carbon source
D,L-Lactate (C)
-0.5
-0.0
-1.3
-0.8
+0.0
carbon source
D-Gluconic Acid (C)
+0.1
-0.2
-1.5
-1.2
+0.1
carbon source
D,L-Lactate (C)
-0.2
+0.1
-1.4
-0.9
-0.2
carbon source
D-Lactate (C)
-0.6
-0.1
-1.1
-0.8
+0.1
carbon source
L-Glutamine (C)
-0.3
+0.0
-1.4
-0.8
+0.0
carbon source
L-Lactate (C)
-0.4
-0.0
-1.2
-0.8
-0.1
nitrogen source
L-Glutamine (N)
-0.4
-0.1
-1.2
-0.8
+0.1
nitrogen source
Uridine (N)
-0.0
-0.2
-1.7
-0.5
+0.1
stress
Cisplatin 0.0025 mg/ml
-2.9
+0.3
-0.1
+0.2
+0.1
carbon source
L-Arabinose (C)
-1.1
-0.2
-0.8
-0.5
+0.3
stress
Zinc 1 mM
-2.0
-0.3
+0.1
-0.2
+0.3
carbon source
L-Lactate (C)
-0.4
-0.1
-1.0
-0.7
+0.2
carbon source
D-Gluconic Acid (C)
+0.3
-0.0
-1.5
-0.8
-0.0
carbon source
Glycerol (C)
-0.7
-0.1
-0.7
-0.5
-0.1
carbon source
D,L-Lactate (C)
-0.0
-0.0
-1.1
-0.7
-0.0
carbon source
D-Lactate (C)
+0.1
-0.1
-1.3
-0.7
+0.1
stress
Bacitracin 0.008 mg/ml
-1.7
-0.1
-0.0
-0.1
-0.1
carbon source
L-Lactate (C)
-0.3
-0.1
-1.2
-0.5
+0.2
stress
Cisplatin 0.005 mg/ml
-1.0
-0.1
-0.1
-0.7
+0.0
nitrogen source
L-Leucine (N)
-0.3
+0.0
-1.1
-0.8
+0.3
nitrogen source
L-Isoleucine (N)
+0.2
-0.0
-1.5
-0.4
-0.0
stress
perchlorate 10 mM
-1.4
+0.1
+0.0
-0.1
+0.2
nitrogen source
D-Alanine (N)
+0.1
-0.3
-0.8
-0.6
+0.5
lb
LB
-1.8
+0.0
+0.1
+0.2
+0.4
stress
Sisomicin 0.001 mg/ml
-1.4
+0.2
+0.3
+0.1
+0.2
stress
copper (II) chloride 2 mM
-1.1
+0.0
+0.5
+0.2
+0.1
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