Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_2462 and Ac3H11_2463 are separated by 150 nucleotidesAc3H11_2463 and Ac3H11_2464 overlap by 4 nucleotidesAc3H11_2464 and Ac3H11_2465 are separated by 84 nucleotidesAc3H11_2465 and Ac3H11_2466 are separated by 90 nucleotides Ac3H11_2462 - Protein phosphatase 2C-like, at 726,565 to 727,371 _2462 Ac3H11_2463 - Translation initiation factor 2 (IF-2; GTPase), at 727,522 to 728,226 _2463 Ac3H11_2464 - ATPase component BioM of energizing module of biotin ECF transporter, at 728,223 to 729,320 _2464 Ac3H11_2465 - Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4), at 729,405 to 730,832 _2465 Ac3H11_2466 - Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61), at 730,923 to 732,191 _2466
Group Condition Ac3H11_2462 Ac3H11_2463 Ac3H11_2464 Ac3H11_2465 Ac3H11_2466
nitrogen source L-Leucine (N) +0.2 -0.2 -4.1 N.D. N.D.
nitrogen source L-Threonine (N) -0.1 +0.1 -4.1 N.D. N.D.
carbon source D-Mannose (C) +0.0 -0.4 -3.0 N.D. N.D.
carbon source D-Glucose (C) -0.0 -0.1 -3.2 N.D. N.D.
nitrogen source Uridine (N) -0.1 +0.4 -3.3 N.D. N.D.
stress nitrite 10 mM -0.1 +0.1 -3.0 N.D. N.D.
nitrogen source Ammonium chloride (N) +0.3 -0.2 -3.1 N.D. N.D.
nitrogen source L-Glutamine (N) +0.0 -0.2 -2.7 N.D. N.D.
carbon source a-Ketoglutaric (C) -0.1 -0.4 -2.2 N.D. N.D.
nitrogen source L-Isoleucine (N) -0.1 +0.6 -3.2 N.D. N.D.
nitrogen source L-Serine (N) -0.0 -0.0 -2.7 N.D. N.D.
carbon source D-Fructose (C) +0.1 -0.2 -2.6 N.D. N.D.
temperature LB 30C +0.2 -0.2 -2.6 N.D. N.D.
carbon source D-Sorbitol (C) +0.0 -0.3 -2.3 N.D. N.D.
carbon source D-Glucose (C) -0.1 +0.2 -2.7 N.D. N.D.
carbon source L-Lactate (C) -0.0 -0.5 -1.9 N.D. N.D.
nitrogen source D-Alanine (N) +0.2 +0.4 -3.0 N.D. N.D.
nitrogen source L-Histidine (N) +0.0 +0.4 -2.7 N.D. N.D.
nitrogen source L-Proline (N) +0.1 -0.4 -2.0 N.D. N.D.
carbon source succinate (C) +0.2 -0.9 -1.6 N.D. N.D.
temperature LB 30C +0.1 -0.4 -1.8 N.D. N.D.
motility inner cut, R2A soft agar motility assay +0.0 -0.5 -1.7 N.D. N.D.
carbon source D-Galactose (C) +0.0 +0.2 -2.1 N.D. N.D.
stress syringaldehyde 2.5 mM +0.2 -0.4 -1.7 N.D. N.D.
motility inner cut, R2A soft agar motility assay +0.3 -0.2 -1.7 N.D. N.D.
carbon source D-Gluconic Acid (C) -0.2 +0.3 +1.9 N.D. N.D.
stress Cisplatin 0.005 mg/ml +0.2 +0.3 +1.8 N.D. N.D.
stress copper (II) chloride 2 mM -0.0 +1.2 +1.5 N.D. N.D.
pH LB, pH10 -0.3 +1.1 +3.1 N.D. N.D.
pH LB, pH10 +0.4 +1.1 +2.9 N.D. N.D.
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