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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_2455 and Ac3H11_2456 are separated by 248 nucleotides
Ac3H11_2456 and Ac3H11_2457 are separated by 57 nucleotides
Ac3H11_2457 and Ac3H11_2458 are separated by 205 nucleotides
Ac3H11_2458 and Ac3H11_2459 are separated by 121 nucleotides
Ac3H11_2455 - Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-), at 715,168 to 716,553
_2455
Ac3H11_2456 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 716,802 to 719,150
_2456
Ac3H11_2457 - ATP-dependent Clp protease adaptor protein ClpS, at 719,208 to 719,492
_2457
Ac3H11_2458 - DNA polymerase III alpha subunit (EC 2.7.7.7), at 719,698 to 723,312
_2458
Ac3H11_2459 - Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB), at 723,434 to 724,231
_2459
Group
Condition
Ac3H11
_2455
Ac3H11
_2456
Ac3H11
_2457
Ac3H11
_2458
Ac3H11
_2459
carbon source
D-Glucose (C)
-0.1
-2.8
-0.7
N.D.
N.D.
nitrogen source
L-Threonine (N)
-0.1
-3.1
-0.4
N.D.
N.D.
carbon source
D-Glucose (C)
-0.0
-2.5
-0.7
N.D.
N.D.
stress
sodium fluoride 20 mM
+0.1
-3.1
-0.2
N.D.
N.D.
nitrogen source
Ammonium chloride (N)
+0.3
-2.8
-0.7
N.D.
N.D.
nitrogen source
L-Leucine (N)
+0.2
-2.6
-0.8
N.D.
N.D.
nitrogen source
L-Isoleucine (N)
+0.2
-2.4
-0.8
N.D.
N.D.
carbon source
D-Galactose (C)
-0.0
-2.2
-0.6
N.D.
N.D.
pH
LB, pH10
-0.4
-2.4
-0.0
N.D.
N.D.
nitrogen source
L-tyrosine (N)
+0.1
-2.6
-0.3
N.D.
N.D.
pH
LB, pH10
+0.0
-2.6
-0.1
N.D.
N.D.
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.2
-2.8
+0.0
N.D.
N.D.
carbon source
propionate (C)
-0.2
-1.5
-0.6
N.D.
N.D.
carbon source
D-Galactose (C)
+0.1
-1.8
-0.6
N.D.
N.D.
carbon source
D-Galactose (C)
+0.1
-1.7
-0.8
N.D.
N.D.
stress
perchlorate 10 mM
+0.0
-2.3
+0.0
N.D.
N.D.
stress
Sisomicin 0.0005 mg/ml
-0.2
-1.9
+0.2
N.D.
N.D.
stress
Zinc 1 mM
+0.2
-2.5
+0.5
N.D.
N.D.
carbon source
D-Mannose (C)
+0.3
-1.6
-0.5
N.D.
N.D.
stress
Cobalt chloride 0.16 mM
+0.0
-2.1
+0.3
N.D.
N.D.
stress
Fusidic 0.001 mg/ml
-0.1
-1.8
+0.5
N.D.
N.D.
stress
Cisplatin 0.005 mg/ml
+0.2
-2.0
+0.5
N.D.
N.D.
stress
Paraquat dichloride 0.01 mg/ml
+0.2
-2.0
+0.6
N.D.
N.D.
stress
Phosphomycin 0.02 mg/ml
+0.3
-1.8
+0.4
N.D.
N.D.
lb
LB
+0.2
-1.6
+0.5
N.D.
N.D.
stress
nitrite 10 mM
+0.3
-1.5
+0.5
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
-0.1
+2.5
+0.3
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
-0.1
+2.8
+0.4
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
-0.2
+5.5
+0.4
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
-0.1
+6.0
+0.7
N.D.
N.D.
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