Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_2214 and Ac3H11_2215 are separated by 141 nucleotidesAc3H11_2215 and Ac3H11_2216 are separated by 51 nucleotidesAc3H11_2216 and Ac3H11_2217 overlap by 4 nucleotidesAc3H11_2217 and Ac3H11_2218 are separated by 124 nucleotides Ac3H11_2214 - ADA regulatory protein, at 445,838 to 447,400 _2214 Ac3H11_2215 - Phosphomannomutase (EC 5.4.2.8), at 447,542 to 448,930 _2215 Ac3H11_2216 - Hydrolase, carbon-nitrogen family, at 448,982 to 449,779 _2216 Ac3H11_2217 - Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also], at 449,776 to 451,143 _2217 Ac3H11_2218 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 451,268 to 453,568 _2218
Group Condition Ac3H11_2214 Ac3H11_2215 Ac3H11_2216 Ac3H11_2217 Ac3H11_2218
stress copper (II) chloride 2 mM -0.1 N.D. -0.5 N.D. -0.2
stress D-Cycloserine 0.05 mg/ml -0.6 N.D. -0.1 N.D. +0.2
carbon source L-Lactate (C) +0.1 N.D. -0.6 N.D. +0.1
phage phage 93.2 +0.1 N.D. -0.6 N.D. +0.2
stress Phosphomycin 0.02 mg/ml +0.2 N.D. -0.5 N.D. +0.2
carbon source D-Lactate (C) +0.3 N.D. -0.4 N.D. +0.0
carbon source L-Malic (C) +0.5 N.D. -0.6 N.D. +0.1
stress Cisplatin 0.0025 mg/ml +0.6 N.D. -0.5 N.D. -0.1
stress Nickel (II) chloride 0.8 mM -0.5 N.D. +0.4 N.D. +0.2
carbon source L-Asparagine (C) +0.4 N.D. -0.3 N.D. +0.1
carbon source a-Ketoglutaric (C) +1.1 N.D. -0.8 N.D. +0.1
stress nitrate 20 mM -0.3 N.D. +0.4 N.D. +0.2
lb LB -0.3 N.D. +0.5 N.D. +0.1
stress Chlorite 0.1 mM +0.5 N.D. -0.2 N.D. +0.1
stress Cisplatin 0.005 mg/ml -0.5 N.D. +0.5 N.D. +0.5
carbon source D-Gluconic Acid (C) +0.6 N.D. -0.1 N.D. +0.1
nitrogen source L-Leucine (N) -0.1 N.D. +0.6 N.D. +0.2
motility inner cut, R2A soft agar motility assay +0.7 N.D. -0.1 N.D. +0.1
pH LB, pH10 -0.0 N.D. +0.3 N.D. +0.4
carbon source D-Gluconic Acid (C) +0.8 N.D. -0.2 N.D. +0.1
stress Fusidic 0.001 mg/ml +0.4 N.D. +0.3 N.D. +0.2
carbon source a-Ketoglutaric (C) +0.9 N.D. -0.1 N.D. +0.0
carbon source pyruvate (C) +0.6 N.D. +0.0 N.D. +0.1
nitrogen source L-Threonine (N) +0.1 N.D. +0.7 N.D. +0.1
carbon source D-Fructose (C) +0.6 N.D. +0.1 N.D. +0.2
phage phage 93.1 +0.7 N.D. +0.1 N.D. +0.2
temperature LB 30C +0.4 N.D. +0.5 N.D. +0.1
nitrogen source D-Alanine (N) +0.3 N.D. +0.6 N.D. +0.2
nitrogen source Ammonium chloride (N) +0.4 N.D. +0.6 N.D. +0.1
pH LB, pH10 +0.4 N.D. +0.5 N.D. +0.3
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