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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_2155 and Ac3H11_2156 are separated by 79 nucleotides
Ac3H11_2156 and Ac3H11_2157 overlap by 4 nucleotides
Ac3H11_2157 and Ac3H11_2158 are separated by 514 nucleotides
Ac3H11_2158 and Ac3H11_2159 overlap by 4 nucleotides
Ac3H11_2155 - hypothetical protein, at 383,474 to 384,898
_2155
Ac3H11_2156 - Two-component response regulator CreC, at 384,978 to 386,444
_2156
Ac3H11_2157 - hypothetical protein, at 386,441 to 386,605
_2157
Ac3H11_2158 - Inner membrane protein CreD, at 387,120 to 388,625
_2158
Ac3H11_2159 - hypothetical protein, at 388,622 to 388,990
_2159
Group
Condition
Ac3H11
_2155
Ac3H11
_2156
Ac3H11
_2157
Ac3H11
_2158
Ac3H11
_2159
stress
Cisplatin 0.0025 mg/ml
-0.3
-0.0
-3.7
-0.2
N.D.
motility
inner cut, R2A soft agar motility assay
-0.4
-0.5
-1.9
-0.3
N.D.
phage
phage 93.2
-0.4
-0.4
-1.5
-0.4
N.D.
carbon source
Glycerol (C)
-0.2
-0.3
-1.4
-0.4
N.D.
carbon source
pyruvate (C)
-0.4
-0.4
-1.0
-0.5
N.D.
lb
LB
-0.1
-0.1
-1.7
-0.3
N.D.
carbon source
D-Galactose (C)
-0.4
-0.4
-0.8
-0.6
N.D.
nitrogen source
L-Arginine (N)
-0.4
-0.3
-1.3
-0.3
N.D.
carbon source
succinate (C)
-0.4
-0.1
-1.0
-0.6
N.D.
nitrogen source
L-Threonine (N)
-0.1
-0.2
-1.5
-0.3
N.D.
carbon source
D-Galactose (C)
-0.4
-0.4
-0.8
-0.5
N.D.
phage
phage 93.1
-0.5
-0.6
-0.6
-0.5
N.D.
lb
LB
-0.2
-0.2
-1.4
-0.2
N.D.
nitrogen source
Ammonium chloride (N)
-0.0
-0.2
-1.6
-0.1
N.D.
carbon source
D-Lactate (C)
-0.3
-0.4
-0.7
-0.6
N.D.
nitrogen source
L-Isoleucine (N)
-0.1
-0.3
-1.4
-0.3
N.D.
stress
Phosphomycin 0.06 mg/ml
-0.2
-0.2
-1.4
-0.1
N.D.
stress
Cephalothin 0.01 mg/ml
-0.2
-0.3
-1.2
-0.2
N.D.
carbon source
D-Lactate (C)
-0.3
-0.4
-0.6
-0.6
N.D.
carbon source
D-Mannose (C)
-0.2
-0.2
-1.1
-0.3
N.D.
carbon source
L-Lactate (C)
-0.3
-0.2
-0.9
-0.4
N.D.
stress
nitrate 45 mM
-0.2
-0.2
-1.2
-0.3
N.D.
pH
LB, pH8
-0.3
-0.2
-0.9
-0.4
N.D.
temperature
LB 30C
-0.2
-0.2
-0.9
-0.4
N.D.
carbon source
L-Malic (C)
-0.2
-0.2
-0.9
-0.5
N.D.
carbon source
D,L-Lactate (C)
-0.3
-0.5
-0.5
-0.4
N.D.
nitrogen source
L-Serine (N)
-0.4
-0.4
-0.6
-0.4
N.D.
stress
nitrate 100 mM
-0.3
+0.0
-1.2
-0.2
N.D.
pH
LB, pH10
-0.3
-0.5
+0.9
-0.4
N.D.
pH
LB, pH10
-0.5
-0.6
+1.1
-0.3
N.D.
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