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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_2065 and Ac3H11_2066 are separated by 14 nucleotides
Ac3H11_2066 and Ac3H11_2067 are separated by 229 nucleotides
Ac3H11_2067 and Ac3H11_2068 are separated by 23 nucleotides
Ac3H11_2068 and Ac3H11_2069 are separated by 75 nucleotides
Ac3H11_2065 - glucose ABC transporter, permease component 2
(from data)
, at 289,856 to 290,725
_2065
Ac3H11_2066 - glucose ABC transporter, ATPase component
(from data)
, at 290,740 to 291,807
_2066
Ac3H11_2067 - Glucokinase (EC 2.7.1.2), at 292,037 to 293,014
_2067
Ac3H11_2068 - FIG01280259: hypothetical protein, at 293,038 to 293,439
_2068
Ac3H11_2069 - Transketolase, C-terminal section (EC 2.2.1.1), at 293,515 to 294,519
_2069
Group
Condition
Ac3H11
_2065
Ac3H11
_2066
Ac3H11
_2067
Ac3H11
_2068
Ac3H11
_2069
carbon source
D-Glucose (C)
-5.3
-4.6
-7.6
N.D.
-0.2
carbon source
D-Glucose (C)
-4.6
-4.5
-7.6
N.D.
+0.3
nitrogen source
L-Histidine (N)
-3.2
-3.2
-6.3
N.D.
+0.0
nitrogen source
L-Threonine (N)
-2.1
-2.6
-3.4
N.D.
-0.3
nitrogen source
Ammonium chloride (N)
-3.2
-2.3
-1.8
N.D.
+0.2
nitrogen source
L-Serine (N)
-1.7
-1.9
-2.2
N.D.
+0.2
nitrogen source
L-Arginine (N)
-1.5
-1.5
-1.6
N.D.
-0.0
carbon source
D-Mannose (C)
-1.6
-1.5
-0.3
N.D.
-0.3
nitrogen source
L-Alanine (N)
-0.9
-0.4
-1.1
N.D.
-0.5
pH
LB, pH10
-0.6
-0.1
-1.0
N.D.
-0.5
pH
LB, pH10
-0.1
-0.3
-1.2
N.D.
-0.6
nitrogen source
L-Glutamine (N)
-0.5
-0.3
-0.5
N.D.
-0.3
stress
Chlorite 0.1 mM
-0.1
-0.4
-0.4
N.D.
-0.5
stress
Phosphomycin 0.06 mg/ml
+0.2
-0.1
-0.9
N.D.
-0.3
carbon source
L-Malic (C)
-0.0
-0.2
-0.4
N.D.
-0.4
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.3
+0.1
-0.5
N.D.
-0.2
phage
phage 93.2
-0.6
+0.1
-0.3
N.D.
-0.1
nitrogen source
L-Phenylalanine (N)
+0.2
-0.3
-0.6
N.D.
-0.0
motility
inner cut, R2A soft agar motility assay
+0.2
-0.1
-0.3
N.D.
-0.5
carbon source
D-Gluconic Acid (C)
-0.6
+0.1
+0.2
N.D.
-0.2
phage
phage 93.1
-0.7
+0.0
+0.3
N.D.
-0.1
stress
Cobalt chloride 0.32 mM
+0.2
+0.1
-0.6
N.D.
-0.1
nitrogen source
D-Alanine (N)
-0.4
+0.0
+0.3
N.D.
-0.3
motility
inner cut, R2A soft agar motility assay
-0.2
-0.2
-0.4
N.D.
+0.4
stress
Cisplatin 0.005 mg/ml
+0.4
+0.2
-0.3
N.D.
-0.6
stress
Ceftazidime 0.01 mg/ml
+0.0
+0.0
+0.5
N.D.
-0.5
stress
Nickel (II) chloride 0.6 mM
+0.5
-0.2
-0.1
N.D.
+0.3
carbon source
D-Ribose (C)
+0.4
+0.4
-0.3
N.D.
+0.1
carbon source
D-Ribose (C)
+0.4
+0.7
-0.0
N.D.
-0.3
stress
Cobalt chloride 0.4 mM
+0.3
-0.1
+0.6
N.D.
-0.1
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