Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1998 and Ac3H11_1999 are separated by 84 nucleotidesAc3H11_1999 and Ac3H11_2000 overlap by 12 nucleotidesAc3H11_2000 and Ac3H11_2001 are separated by 125 nucleotidesAc3H11_2001 and Ac3H11_2002 are separated by 180 nucleotides Ac3H11_1998 - Positive regulator of CheA protein activity (CheW), at 215,358 to 215,885 _1998 Ac3H11_1999 - hypothetical protein, at 215,970 to 216,140 _1999 Ac3H11_2000 - LSU m5C1962 methyltransferase RlmI, at 216,129 to 217,322 _2000 Ac3H11_2001 - Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family, at 217,448 to 218,509 _2001 Ac3H11_2002 - C4-type zinc finger protein, DksA/TraR family, at 218,690 to 219,517 _2002
Group Condition Ac3H11_1998 Ac3H11_1999 Ac3H11_2000 Ac3H11_2001 Ac3H11_2002
stress Bacitracin 0.032 mg/ml +0.1 N.D. +0.0 -1.4 -1.4
stress Paraquat dichloride 0.01 mg/ml -0.3 N.D. +0.3 -1.8 -0.8
stress Bacitracin 0.008 mg/ml +0.0 N.D. +0.1 -1.7 -0.9
stress Cisplatin 0.0025 mg/ml -0.0 N.D. +0.1 -1.4 -1.2
lb LB +0.2 N.D. +0.0 -2.3 -0.4
stress Bacitracin 0.016 mg/ml -0.0 N.D. -0.2 -1.3 -0.6
stress Sisomicin 0.001 mg/ml -0.3 N.D. -0.1 -1.7 +0.1
nitrogen source L-Threonine (N) -0.1 N.D. -0.0 +0.1 -1.8
stress Phosphomycin 0.06 mg/ml -0.3 N.D. +0.2 -1.6 -0.1
stress Sisomicin 0.0005 mg/ml -0.1 N.D. +0.1 -0.7 -1.2
stress Chlorite 0.1 mM +0.2 N.D. -0.3 -2.0 +0.3
lb LB +0.0 N.D. -0.0 -1.6 -0.1
stress copper (II) chloride 1 mM +0.0 N.D. -0.1 -1.0 -0.7
stress Phosphomycin 0.02 mg/ml +0.0 N.D. +0.2 -1.7 -0.3
stress copper (II) chloride 2 mM -0.2 N.D. -0.4 -0.5 -0.5
stress Aluminum chloride 2 mM +0.0 N.D. +0.1 -0.8 -0.8
stress Chlorate 20 mM +0.0 N.D. +0.2 -0.8 -0.8
stress sodium fluoride 20 mM -0.1 N.D. +0.2 +0.1 -1.6
lb LB -0.0 N.D. -0.1 -1.9 +0.6
carbon source succinate (C) -0.2 N.D. +0.1 -0.1 -1.1
stress perchlorate 10 mM +0.2 N.D. +0.1 -1.6 +0.2
stress Cisplatin 0.005 mg/ml -0.0 N.D. +0.3 -1.3 +0.3
stress A22 0.025 mg/ml +0.2 N.D. -0.2 -1.1 +0.6
stress Fusidic 0.001 mg/ml -0.0 N.D. +0.1 -1.1 +0.6
pH LB, pH10 -0.2 N.D. -0.3 +0.5 +1.1
pH LB, pH9 +0.2 N.D. +0.1 +0.2 +1.1
phage phage 93.2 +0.0 N.D. +0.2 -0.2 +1.5
carbon source D-Gluconic Acid (C) +0.3 N.D. +0.1 +0.6 +0.6
nitrogen source L-tyrosine (N) +0.1 N.D. +0.1 +0.4 +1.4
pH LB, pH10 +0.3 N.D. +0.1 +0.9 +2.6
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