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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_1951 and Ac3H11_1952 are separated by 92 nucleotides
Ac3H11_1952 and Ac3H11_1953 are separated by 61 nucleotides
Ac3H11_1953 and Ac3H11_1954 are separated by 178 nucleotides
Ac3H11_1954 and Ac3H11_1955 are separated by 119 nucleotides
Ac3H11_1951 - TRAP-type C4-dicarboxylate transport system, small permease component, at 165,618 to 166,166
_1951
Ac3H11_1952 - hypothetical protein, at 166,259 to 166,387
_1952
Ac3H11_1953 - Transcriptional regulator, at 166,449 to 167,381
_1953
Ac3H11_1954 - Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4), at 167,560 to 168,459
_1954
Ac3H11_1955 - Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4), at 168,579 to 169,478
_1955
Group
Condition
Ac3H11
_1951
Ac3H11
_1952
Ac3H11
_1953
Ac3H11
_1954
Ac3H11
_1955
carbon source
L-Asparagine (C)
-0.0
-0.6
-2.0
-2.5
-3.0
stress
Sisomicin 0.0005 mg/ml
-0.3
-0.3
-3.9
+0.0
-2.9
stress
Cisplatin 0.005 mg/ml
-0.5
-1.2
-0.9
-1.2
-2.6
carbon source
L-Glutamine (C)
+0.2
+0.3
-4.2
-0.5
-2.0
nitrogen source
L-Leucine (N)
+0.1
-1.0
-3.1
-0.3
-1.8
stress
Cobalt chloride 0.32 mM
+0.3
-1.0
-2.5
+0.2
-3.0
pH
LB, pH10
-0.7
-0.8
-2.5
-0.1
-1.9
stress
Phosphomycin 0.02 mg/ml
-0.1
-0.3
-2.3
-0.2
-2.8
stress
Chlorate 20 mM
-0.1
-0.6
-2.2
-0.2
-2.4
nitrogen source
L-Threonine (N)
-0.5
-0.4
-3.1
-0.4
-1.1
lb
LB
-0.4
+0.1
-2.4
-0.3
-2.4
stress
Thallium(I) acetate 0.0006 mg/ml
+0.2
+0.0
-3.8
-0.1
-1.6
stress
sodium fluoride 25 mM
+0.0
+0.2
-2.2
-0.1
-3.1
lb
LB
+0.2
-0.4
-2.3
-0.2
-2.1
stress
Sisomicin 0.001 mg/ml
+0.4
-0.4
-2.0
-0.1
-2.8
stress
Chlorite 0.1 mM
-0.1
-1.2
-0.1
-0.3
-3.0
stress
sodium fluoride 50 mM
+0.0
-0.2
-2.4
-0.2
-1.8
nitrogen source
Ammonium chloride (N)
-0.4
-1.0
-2.1
-0.1
-0.9
carbon source
propionate (C)
-0.2
+0.1
-3.0
+0.1
-1.6
stress
perchlorate 10 mM
+0.4
-0.3
-1.0
-0.5
-2.9
stress
Cobalt chloride 0.32 mM
-0.4
+0.6
-3.6
+0.3
-1.1
pH
LB, pH5
+0.1
-0.3
-3.2
-0.1
-0.5
stress
Cobalt chloride 0.32 mM
-0.1
+0.2
-1.5
+0.1
-2.4
stress
Nickel (II) chloride 0.8 mM
+0.3
+0.5
-2.3
-0.3
-1.6
nitrogen source
D-Alanine (N)
+0.0
+0.4
-1.5
+0.4
-2.6
lb
LB
-0.2
-0.6
+1.0
-0.4
-3.0
lb
LB
+0.3
+0.5
-2.2
-0.3
-1.6
stress
nitrate 100 mM
+0.0
+0.7
-1.6
-0.4
-1.8
stress
syringaldehyde 2.5 mM
+0.1
+1.6
-2.7
-0.1
-1.6
stress
D-Cycloserine 0.05 mg/ml
+0.3
+0.4
+3.2
+0.8
+1.1
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