Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1934 and Ac3H11_1935 are separated by 204 nucleotidesAc3H11_1935 and Ac3H11_1936 are separated by 7 nucleotidesAc3H11_1936 and Ac3H11_1937 overlap by 4 nucleotidesAc3H11_1937 and Ac3H11_1938 overlap by 4 nucleotides Ac3H11_1934 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 148,982 to 150,148 _1934 Ac3H11_1935 - Acetyl-coenzyme A synthetase (EC 6.2.1.1), at 150,353 to 152,209 _1935 Ac3H11_1936 - Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1), at 152,217 to 153,035 _1936 Ac3H11_1937 - Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1), at 153,032 to 153,871 _1937 Ac3H11_1938 - Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1), at 153,868 to 154,944 _1938
Group Condition Ac3H11_1934 Ac3H11_1935 Ac3H11_1936 Ac3H11_1937 Ac3H11_1938
stress Bacitracin 0.032 mg/ml -0.1 +0.1 -0.4 -1.0 +0.3
stress Cisplatin 0.0025 mg/ml +0.0 -0.3 -0.0 -0.7 -0.0
stress Cobalt chloride 0.4 mM -0.1 +0.2 -0.4 -0.7 -0.1
stress nitrite 10 mM -0.0 -0.0 -0.1 -0.8 -0.1
stress D-Cycloserine 0.05 mg/ml -0.2 -0.5 -0.1 -0.2 -0.1
lb LB +0.0 +0.0 -0.7 -0.3 -0.0
nitrogen source L-Isoleucine (N) -0.3 -0.4 +0.2 -0.4 -0.0
carbon source a-Ketoglutaric (C) -0.2 +0.0 -0.4 +0.3 -0.3
motility inner cut, R2A soft agar motility assay -0.0 +0.2 -0.1 -0.8 +0.2
lb LB +0.1 +0.1 +0.1 -0.7 +0.1
pH LB, pH9 -0.0 -0.3 -0.0 +0.4 -0.3
stress Nickel (II) chloride 0.8 mM -0.3 -0.2 +0.3 -0.1 +0.1
stress Bacitracin 0.008 mg/ml -0.1 -0.0 +0.5 -0.2 -0.1
stress copper (II) chloride 2 mM -0.4 +0.1 +0.6 -0.1 -0.2
motility inner cut, R2A soft agar motility assay -0.1 +0.0 +0.1 -0.4 +0.5
carbon source succinate (C) +0.2 -0.2 -0.2 +0.1 +0.2
pH LB, pH10 -0.2 -0.4 +0.1 +0.5 +0.2
stress Nickel (II) chloride 0.6 mM -0.1 -0.0 +0.3 +0.5 -0.3
stress Sisomicin 0.001 mg/ml +0.2 +0.0 -0.4 +0.4 +0.2
stress Paraquat dichloride 0.01 mg/ml +0.3 +0.1 -0.5 +0.8 -0.0
stress Polymyxin B sulfate 0.0001 mg/ml +0.2 -0.0 +0.1 +0.6 -0.2
pH LB, pH10 -0.1 -0.3 +0.3 +0.7 +0.2
stress Cisplatin 0.005 mg/ml +0.2 +0.4 -0.1 -0.0 +0.3
carbon source D,L-Lactate (C) +0.2 +0.1 +0.3 +0.3 +0.1
nitrogen source Ammonium chloride (N) +0.1 -0.5 +0.2 +0.6 +0.6
stress Nickel (II) chloride 0.6 mM +0.1 -0.0 +0.1 +0.7 +0.1
motility inner cut, R2A soft agar motility assay +0.1 +0.2 +0.4 +0.4 -0.2
stress sodium fluoride 20 mM +0.0 +0.2 +0.3 +0.3 +0.2
phage phage 93.2 +0.2 +0.5 -0.3 +1.0 -0.3
carbon source D-Lactate (C) +0.3 +0.1 -0.0 +0.5 +0.3
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