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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_1917 and Ac3H11_1918 are separated by 27 nucleotides
Ac3H11_1918 and Ac3H11_1919 are separated by 12 nucleotides
Ac3H11_1919 and Ac3H11_1920 are separated by 1395 nucleotides
Ac3H11_1920 and Ac3H11_1921 are separated by 895 nucleotides
Ac3H11_1917 - conserved hypothetical protein, at 125,809 to 126,699
_1917
Ac3H11_1918 - TesB-like acyl-CoA thioesterase 2, at 126,727 to 127,593
_1918
Ac3H11_1919 - Enoyl-CoA hydratase (EC 4.2.1.17), at 127,606 to 128,445
_1919
Ac3H11_1920 - Mobile element protein, at 129,841 to 129,954
_1920
Ac3H11_1921 - Acyclic terpenes utilization regulator AtuR, TetR family, at 130,850 to 131,575
_1921
Group
Condition
Ac3H11
_1917
Ac3H11
_1918
Ac3H11
_1919
Ac3H11
_1920
Ac3H11
_1921
lb
LB
-0.1
-0.2
-0.1
N.D.
-0.5
stress
copper (II) chloride 2 mM
+0.1
-0.5
+0.1
N.D.
-0.4
stress
D-Cycloserine 0.05 mg/ml
-0.3
-0.3
+0.0
N.D.
-0.1
carbon source
D-Ribose (C)
-0.2
-0.2
-0.0
N.D.
-0.2
nitrogen source
L-Isoleucine (N)
-0.1
-0.0
-0.3
N.D.
-0.2
carbon source
D-Galactose (C)
-0.1
-0.2
+0.1
N.D.
-0.2
carbon source
propionate (C)
-0.1
-0.3
-0.1
N.D.
+0.1
nitrogen source
L-Alanine (N)
-0.4
-0.1
+0.1
N.D.
-0.1
stress
Cisplatin 0.0025 mg/ml
-0.2
-0.2
+0.2
N.D.
-0.2
lb
LB
-0.1
+0.1
-0.2
N.D.
-0.2
stress
perchlorate 25 mM
+0.1
-0.2
-0.2
N.D.
-0.1
stress
Bacitracin 0.008 mg/ml
-0.0
+0.2
-0.1
N.D.
-0.4
carbon source
a-Ketoglutaric (C)
+0.1
-0.2
+0.1
N.D.
-0.2
stress
perchlorate 10 mM
-0.3
+0.2
+0.0
N.D.
-0.1
stress
nitrite 10 mM
+0.2
+0.0
-0.1
N.D.
-0.2
stress
copper (II) chloride 1 mM
-0.1
-0.3
+0.1
N.D.
+0.1
nitrogen source
D-Alanine (N)
+0.2
+0.2
+0.0
N.D.
-0.5
stress
Paraquat dichloride 0.01 mg/ml
+0.0
-0.1
+0.2
N.D.
-0.2
motility
inner cut, R2A soft agar motility assay
-0.2
-0.3
+0.4
N.D.
+0.2
stress
Cobalt chloride 0.32 mM
+0.0
+0.3
+0.1
N.D.
-0.2
stress
Nickel (II) chloride 0.8 mM
+0.2
+0.2
+0.1
N.D.
-0.1
motility
inner cut, R2A soft agar motility assay
+0.2
-0.1
+0.2
N.D.
+0.1
nitrogen source
Ammonium chloride (N)
+0.4
+0.5
+0.2
N.D.
-0.7
lb
LB
+0.1
+0.3
+0.1
N.D.
-0.0
stress
sodium fluoride 20 mM
+0.2
+0.3
+0.1
N.D.
-0.0
stress
Sisomicin 0.004 mg/ml
+0.3
+0.1
+0.2
N.D.
+0.0
phage
phage 93.2
+0.3
+0.2
+0.1
N.D.
+0.0
stress
Chloramphenicol 0.001 mg/ml
+0.2
+0.3
+0.1
N.D.
+0.0
carbon source
D-Lactate (C)
+0.3
-0.1
+0.2
N.D.
+0.2
carbon source
D-Gluconic Acid (C)
+0.2
+0.3
+0.0
N.D.
+0.6
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