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Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_1902 and Ac3H11_1903 are separated by 906 nucleotides
Ac3H11_1903 and Ac3H11_1904 are separated by 305 nucleotides
Ac3H11_1904 and Ac3H11_1905 are separated by 76 nucleotides
Ac3H11_1905 and Ac3H11_1906 are separated by 203 nucleotides
Ac3H11_1902 - ABC transporter ATP-binding protein, at 108,080 to 109,300
_1902
Ac3H11_1903 - glycosyl transferase, family 2, at 110,207 to 111,199
_1903
Ac3H11_1904 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89), at 111,505 to 111,846
_1904
Ac3H11_1905 - Lytic transglycosylase, catalytic, at 111,923 to 112,564
_1905
Ac3H11_1906 - Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-), at 112,768 to 113,871
_1906
Group
Condition
Ac3H11
_1902
Ac3H11
_1903
Ac3H11
_1904
Ac3H11
_1905
Ac3H11
_1906
nitrogen source
D-Alanine (N)
N.D.
N.D.
-3.5
N.D.
N.D.
nitrogen source
Ammonium chloride (N)
N.D.
N.D.
-3.3
N.D.
N.D.
stress
Chlorite 0.1 mM
N.D.
N.D.
-3.0
N.D.
N.D.
nitrogen source
L-Glutamine (N)
N.D.
N.D.
-2.8
N.D.
N.D.
lb
LB
N.D.
N.D.
-2.7
N.D.
N.D.
stress
Cobalt chloride 0.16 mM
N.D.
N.D.
-2.6
N.D.
N.D.
stress
Polymyxin B sulfate 0.0001 mg/ml
N.D.
N.D.
-2.4
N.D.
N.D.
stress
perchlorate 25 mM
N.D.
N.D.
-2.4
N.D.
N.D.
stress
copper (II) chloride 1 mM
N.D.
N.D.
-2.4
N.D.
N.D.
stress
Phosphomycin 0.06 mg/ml
N.D.
N.D.
-2.3
N.D.
N.D.
stress
Cobalt chloride 0.32 mM
N.D.
N.D.
-2.3
N.D.
N.D.
nitrogen source
L-Leucine (N)
N.D.
N.D.
-2.1
N.D.
N.D.
stress
Cisplatin 0.005 mg/ml
N.D.
N.D.
-2.0
N.D.
N.D.
stress
Zinc 1 mM
N.D.
N.D.
-2.0
N.D.
N.D.
stress
Fusidic 0.001 mg/ml
N.D.
N.D.
-1.8
N.D.
N.D.
stress
perchlorate 10 mM
N.D.
N.D.
-1.8
N.D.
N.D.
stress
2-Furfuraldehyde 0.06 vol%
N.D.
N.D.
-1.7
N.D.
N.D.
pH
LB, pH7
N.D.
N.D.
-1.5
N.D.
N.D.
stress
Dimethyl Sulfoxide 6 vol%
N.D.
N.D.
-1.5
N.D.
N.D.
stress
Phosphomycin 0.02 mg/ml
N.D.
N.D.
-1.4
N.D.
N.D.
carbon source
D-Sorbitol (C)
N.D.
N.D.
-1.3
N.D.
N.D.
carbon source
pyruvate (C)
N.D.
N.D.
+1.4
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
+1.4
N.D.
N.D.
carbon source
D-Fructose (C)
N.D.
N.D.
+1.4
N.D.
N.D.
carbon source
L-Lactate (C)
N.D.
N.D.
+1.5
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
N.D.
+1.5
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
+1.8
N.D.
N.D.
stress
nitrite 10 mM
N.D.
N.D.
+2.0
N.D.
N.D.
nitrogen source
L-Alanine (N)
N.D.
N.D.
+2.2
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
+2.3
N.D.
N.D.
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