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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_1820 and Ac3H11_1821 are separated by 49 nucleotides
Ac3H11_1821 and Ac3H11_1822 are separated by 33 nucleotides
Ac3H11_1822 and Ac3H11_1823 are separated by 12 nucleotides
Ac3H11_1823 and Ac3H11_1824 are separated by 23 nucleotides
Ac3H11_1820 - COG1565: Uncharacterized conserved protein, at 24,479 to 25,597
_1820
Ac3H11_1821 - hypothetical protein, at 25,647 to 25,805
_1821
Ac3H11_1822 - Thioredoxin, at 25,839 to 26,306
_1822
Ac3H11_1823 - INTEGRAL MEMBRANE PROTEIN (Rhomboid family), at 26,319 to 26,792
_1823
Ac3H11_1824 - Glutamate synthase [NADPH] large chain (EC 1.4.1.13), at 26,816 to 27,577
_1824
Group
Condition
Ac3H11
_1820
Ac3H11
_1821
Ac3H11
_1822
Ac3H11
_1823
Ac3H11
_1824
motility
inner cut, R2A soft agar motility assay
N.D.
N.D.
-0.6
-0.7
-0.1
pH
LB, pH10
N.D.
N.D.
-1.1
+0.2
-0.2
stress
D-Cycloserine 0.05 mg/ml
N.D.
N.D.
-0.9
-0.3
+0.2
stress
Fusidic 0.001 mg/ml
N.D.
N.D.
-0.7
-0.1
-0.0
pH
LB, pH10
N.D.
N.D.
-0.6
-0.1
-0.0
stress
Paraquat dichloride 0.01 mg/ml
N.D.
N.D.
-0.4
+0.2
-0.5
stress
nitrite 10 mM
N.D.
N.D.
-0.7
+0.0
+0.0
stress
copper (II) chloride 1 mM
N.D.
N.D.
-0.2
-0.3
-0.2
carbon source
succinate (C)
N.D.
N.D.
-0.1
-0.3
-0.2
stress
nitrate 45 mM
N.D.
N.D.
-0.5
+0.1
-0.1
carbon source
L-Malic (C)
N.D.
N.D.
-0.4
-0.3
+0.2
nitrogen source
L-Arginine (N)
N.D.
N.D.
-0.3
-0.2
+0.1
stress
2-Furfuraldehyde 0.06 vol%
N.D.
N.D.
-0.3
-0.2
+0.2
stress
Zinc 1 mM
N.D.
N.D.
-0.4
+0.1
+0.1
nitrogen source
L-Threonine (N)
N.D.
N.D.
-0.4
+0.3
+0.0
stress
Cobalt chloride 0.4 mM
N.D.
N.D.
-0.4
+0.2
+0.3
nitrogen source
L-tyrosine (N)
N.D.
N.D.
-0.3
+0.2
+0.1
stress
nitrite 10 mM
N.D.
N.D.
-0.2
+0.4
-0.1
phage
phage 93.1
N.D.
N.D.
+0.3
+0.2
-0.3
stress
Cisplatin 0.005 mg/ml
N.D.
N.D.
+0.4
-0.2
+0.2
carbon source
D,L-Lactate (C)
N.D.
N.D.
+0.5
-0.1
-0.0
stress
Dimethyl Sulfoxide 6 vol%
N.D.
N.D.
+0.3
-0.2
+0.2
nitrogen source
D-Alanine (N)
N.D.
N.D.
-0.3
+0.3
+0.4
stress
Phosphomycin 0.02 mg/ml
N.D.
N.D.
+0.3
+0.4
-0.2
lb
LB
N.D.
N.D.
+0.6
+0.1
-0.2
nitrogen source
L-Proline (N)
N.D.
N.D.
+0.3
-0.1
+0.3
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
+0.2
+0.4
-0.1
carbon source
L-Glutamine (C)
N.D.
N.D.
+0.3
+0.2
+0.3
carbon source
D-Galactose (C)
N.D.
N.D.
+0.3
+0.5
+0.0
nitrogen source
Ammonium chloride (N)
N.D.
N.D.
+0.5
+0.1
+0.4
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