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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_1818 and Ac3H11_1819 are separated by 29 nucleotides
Ac3H11_1819 and Ac3H11_1820 are separated by 15 nucleotides
Ac3H11_1820 and Ac3H11_1821 are separated by 49 nucleotides
Ac3H11_1821 and Ac3H11_1822 are separated by 33 nucleotides
Ac3H11_1818 - Dihydroneopterin aldolase (EC 4.1.2.25), at 23,274 to 23,648
_1818
Ac3H11_1819 - FolM Alternative dihydrofolate reductase 1, at 23,678 to 24,463
_1819
Ac3H11_1820 - COG1565: Uncharacterized conserved protein, at 24,479 to 25,597
_1820
Ac3H11_1821 - hypothetical protein, at 25,647 to 25,805
_1821
Ac3H11_1822 - Thioredoxin, at 25,839 to 26,306
_1822
Group
Condition
Ac3H11
_1818
Ac3H11
_1819
Ac3H11
_1820
Ac3H11
_1821
Ac3H11
_1822
nitrogen source
L-Phenylalanine (N)
N.D.
-6.0
N.D.
N.D.
-0.2
stress
Zinc 1 mM
N.D.
-4.3
N.D.
N.D.
-0.4
stress
Paraquat dichloride 0.01 mg/ml
N.D.
-4.3
N.D.
N.D.
-0.4
stress
Chlorite 0.1 mM
N.D.
-4.2
N.D.
N.D.
+0.0
stress
copper (II) chloride 1 mM
N.D.
-3.7
N.D.
N.D.
-0.2
lb
LB
N.D.
-3.8
N.D.
N.D.
+0.2
stress
Bacitracin 0.016 mg/ml
N.D.
-3.3
N.D.
N.D.
-0.2
stress
perchlorate 10 mM
N.D.
-2.5
N.D.
N.D.
-0.5
stress
Cisplatin 0.005 mg/ml
N.D.
-3.2
N.D.
N.D.
+0.4
pH
LB, pH10
N.D.
-2.1
N.D.
N.D.
-0.6
stress
perchlorate 25 mM
N.D.
-2.2
N.D.
N.D.
-0.2
stress
Phosphomycin 0.06 mg/ml
N.D.
-2.1
N.D.
N.D.
-0.1
motility
inner cut, R2A soft agar motility assay
N.D.
-1.8
N.D.
N.D.
-0.2
stress
Nickel (II) chloride 0.6 mM
N.D.
-1.9
N.D.
N.D.
-0.0
stress
Cobalt chloride 0.32 mM
N.D.
-1.7
N.D.
N.D.
-0.2
nitrogen source
L-Threonine (N)
N.D.
-1.4
N.D.
N.D.
-0.4
stress
nitrate 100 mM
N.D.
-1.5
N.D.
N.D.
-0.3
stress
Cisplatin 0.0025 mg/ml
N.D.
-1.2
N.D.
N.D.
-0.6
phage
phage 93.2
N.D.
-1.6
N.D.
N.D.
-0.0
nitrogen source
Ammonium chloride (N)
N.D.
-2.1
N.D.
N.D.
+0.5
stress
Cobalt chloride 0.32 mM
N.D.
-1.5
N.D.
N.D.
-0.1
nitrogen source
L-tyrosine (N)
N.D.
-1.2
N.D.
N.D.
-0.3
stress
copper (II) chloride 2 mM
N.D.
-1.5
N.D.
N.D.
-0.0
stress
Polymyxin B sulfate 0.0001 mg/ml
N.D.
-1.4
N.D.
N.D.
-0.1
lb
LB
N.D.
-1.5
N.D.
N.D.
+0.0
stress
Aluminum chloride 2 mM
N.D.
-0.9
N.D.
N.D.
-0.5
stress
Fusidic 0.001 mg/ml
N.D.
-0.7
N.D.
N.D.
-0.7
stress
Sisomicin 0.001 mg/ml
N.D.
-1.2
N.D.
N.D.
+0.4
pH
LB, pH10
N.D.
+1.3
N.D.
N.D.
-1.1
stress
Cobalt chloride 0.4 mM
N.D.
+1.0
N.D.
N.D.
-0.4
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