Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1799 and Ac3H11_1800 are separated by 117 nucleotidesAc3H11_1800 and Ac3H11_1801 are separated by 110 nucleotidesAc3H11_1801 and Ac3H11_1802 are separated by 9 nucleotidesAc3H11_1802 and Ac3H11_1803 are separated by 19 nucleotides Ac3H11_1799 - RNA-binding protein Hfq, at 20,515 to 20,769 _1799 Ac3H11_1800 - GTP-binding protein HflX, at 20,887 to 22,008 _1800 Ac3H11_1801 - HflK protein, at 22,119 to 23,438 _1801 Ac3H11_1802 - HflC protein, at 23,448 to 24,356 _1802 Ac3H11_1803 - Putative inner membrane protein YjeT (clustered with HflC), at 24,376 to 24,564 _1803
Group Condition Ac3H11_1799 Ac3H11_1800 Ac3H11_1801 Ac3H11_1802 Ac3H11_1803
stress Polymyxin B sulfate 0.0001 mg/ml N.D. -0.3 -3.6 -2.1 -0.2
stress Sisomicin 0.0005 mg/ml N.D. -0.7 -1.9 -1.5 -0.6
stress Tetracycline 0.0001 mg/ml N.D. -0.2 -2.7 -2.2 +0.9
stress Doxycycline hyclate 0.000025 mg/ml N.D. -0.6 -2.1 -1.4 -0.1
stress Zinc 1 mM N.D. -0.7 -2.0 -1.5 +0.4
nitrogen source Ammonium chloride (N) N.D. +0.0 -1.4 -1.3 -1.1
stress Sisomicin 0.004 mg/ml N.D. -0.2 -1.5 -1.6 +0.2
stress Chloramphenicol 0.001 mg/ml N.D. -0.3 -1.8 -1.1 +0.0
carbon source L-Malic (C) N.D. +0.8 -2.2 -2.5 +0.8
stress Cobalt chloride 0.32 mM N.D. -0.4 -1.3 -1.3 +0.2
stress Cobalt chloride 0.16 mM N.D. -0.3 -1.1 -0.8 -0.6
phage phage 93.1 N.D. +0.0 -0.7 -0.1 -1.7
stress Tetracycline 0.00005 mg/ml N.D. -0.3 -1.4 -1.0 +0.3
stress Cobalt chloride 0.32 mM N.D. -0.2 -1.2 -1.3 +0.3
motility inner cut, R2A soft agar motility assay N.D. -0.0 -0.8 -1.6 +0.2
pH LB, pH5 N.D. +0.3 -1.5 -0.7 -0.4
stress copper (II) chloride 1 mM N.D. -0.3 -1.2 -1.1 +0.6
stress D-Cycloserine 0.05 mg/ml N.D. +1.3 -1.4 -1.0 -0.6
stress Aluminum chloride 4 mM N.D. +0.4 -1.7 -1.1 +0.7
nitrogen source L-Arginine (N) N.D. +0.2 -0.8 -1.1 +0.5
stress nitrate 20 mM N.D. +0.2 -0.9 -1.0 +0.6
lb LB N.D. -0.3 +0.4 +0.4 -1.6
carbon source succinate (C) N.D. +1.0 -1.5 -1.7 +1.2
carbon source a-Ketoglutaric (C) N.D. +0.6 -1.2 -0.8 +0.6
carbon source L-Arabinose (C) N.D. +0.4 -1.0 -1.2 +1.0
stress Cisplatin 0.005 mg/ml N.D. +0.0 -0.7 -0.8 +1.0
stress copper (II) chloride 2 mM N.D. -0.4 -0.6 -0.2 +1.6
carbon source D-Gluconic Acid (C) N.D. -0.1 +1.1 +1.2 -0.0
carbon source D-Gluconic Acid (C) N.D. -0.2 +1.1 +1.2 +0.0
stress nitrite 10 mM N.D. +0.3 +0.5 +1.0 +1.5
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