Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_177 and Ac3H11_178 are separated by 91 nucleotidesAc3H11_178 and Ac3H11_179 are separated by 184 nucleotidesAc3H11_179 and Ac3H11_180 are separated by 196 nucleotidesAc3H11_180 and Ac3H11_181 are separated by 138 nucleotides Ac3H11_177 - D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30), at 65,390 to 66,163 _177 Ac3H11_178 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 66,255 to 67,439 _178 Ac3H11_179 - Tricarboxylate transport protein TctC, at 67,624 to 68,607 _179 Ac3H11_180 - Universal stress protein family, at 68,804 to 69,241 _180 Ac3H11_181 - FIG00538743: hypothetical protein, at 69,380 to 70,156 _181
Group Condition Ac3H11_177 Ac3H11_178 Ac3H11_179 Ac3H11_180 Ac3H11_181
stress nitrate 100 mM -0.4 +0.0 -0.2 +0.1 -1.2
stress copper (II) chloride 1 mM -0.6 -0.2 -0.0 -0.6 -0.1
lb LB -0.0 -0.0 +0.1 -0.4 -0.9
motility inner cut, R2A soft agar motility assay +0.2 +0.1 +0.0 -0.0 -1.5
phage phage 93.1 -0.6 -0.0 +0.1 +0.1 -0.9
carbon source D-Lactate (C) -0.3 +0.1 -0.1 -0.4 -0.4
carbon source pyruvate (C) -0.2 +0.1 +0.1 -0.3 -0.7
stress Cobalt chloride 0.16 mM -0.3 +0.1 +0.0 +0.1 -0.9
carbon source D-Gluconic Acid (C) -0.2 +0.1 +0.3 -0.3 -0.7
lb LB -0.2 +0.1 +0.1 +0.2 -0.9
stress sodium fluoride 25 mM -0.2 +0.2 +0.0 +0.2 -0.7
motility inner cut, R2A soft agar motility assay -0.1 -0.2 -0.4 +0.1 +0.5
stress Paraquat dichloride 0.01 mg/ml -0.2 +0.1 -0.4 -0.1 +0.7
nitrogen source L-Alanine (N) +0.6 +0.1 -0.4 +0.6 -0.7
stress Cisplatin 0.0025 mg/ml +0.5 -0.1 +0.1 +0.3 -0.6
nitrogen source L-Leucine (N) +0.3 +0.2 +0.2 +0.1 -0.4
nitrogen source L-Histidine (N) +0.6 -0.0 +0.2 +0.3 -0.5
motility inner cut, R2A soft agar motility assay -0.4 +0.1 +0.1 -0.0 +1.0
stress Polymyxin B sulfate 0.0001 mg/ml -0.2 +0.3 +0.2 -0.1 +0.7
stress Bacitracin 0.008 mg/ml +0.3 +0.3 +0.1 +0.2 +0.3
nitrogen source L-Threonine (N) +0.6 +0.2 +0.1 -0.2 +0.5
nitrogen source Uridine (N) +0.7 +0.2 +0.1 +0.3 +0.0
stress D-Cycloserine 0.05 mg/ml +1.2 -0.3 -0.1 +0.3 +0.3
temperature LB 23C +1.1 +0.4 +0.0 +0.2 -0.2
temperature LB 23C +1.1 +0.2 -0.1 +0.2 +0.1
temperature LB 30C +0.9 +0.1 -0.1 +0.5 +0.1
nitrogen source D-Alanine (N) +0.5 +0.1 +0.4 +0.2 +0.5
pH LB, pH10 +0.3 +0.1 +0.3 +0.2 +0.7
temperature LB 30C +1.2 +0.3 -0.1 +0.5 +0.5
nitrogen source Ammonium chloride (N) +1.1 +0.1 +0.3 -0.2 +1.2
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